Pseudomonas gorinensis: U771_27445
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Entry
U771_27445 CDS
T02969
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk00260
Glycine, serine and threonine metabolism
psk00460
Cyanoamino acid metabolism
psk00630
Glyoxylate and dicarboxylate metabolism
psk00670
One carbon pool by folate
psk00680
Methane metabolism
psk01100
Metabolic pathways
psk01110
Biosynthesis of secondary metabolites
psk01120
Microbial metabolism in diverse environments
psk01200
Carbon metabolism
psk01230
Biosynthesis of amino acids
psk01240
Biosynthesis of cofactors
psk04981
Folate transport and metabolism
Module
psk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U771_27445
09102 Energy metabolism
00680 Methane metabolism
U771_27445
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U771_27445
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
U771_27445
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U771_27445
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U771_27445
Enzymes [BR:
psk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
U771_27445
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AHC37961
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Position
6023617..6024870
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAIEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKVYQQQVVKNAKAMADV
FIARGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgagtacgtcgacgtggttgagcaactggccatcgac
cgtgccaaagaactgttcggcgccgattacgccaacgtccagccacacgccggctcccaa
gccaacagcgccgtgtacctggccctgctgcaaggcggcgacactatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcgatcgagcacaagccaaaaatgatcgtcgccggtttctctgcttactcgcagatc
ctcgacttcccacgcttccgcgccatcgctgacaaagtcggcgcgtacctgttcgtcgac
atggcccacgtggccggtctggtcgccgcgggcgtctacccgaacccggtaccctttgct
gacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcacgcgccaacgccgagatcgagaagaagctgaactccgccgtattcccaggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaggccatctgcttcaaggaagcgctgcag
cctgagttcaaggtctaccagcaacaagtggtgaaaaacgccaaggccatggccgacgtg
tttatcgcacgcggttttgacgtggtatccggcggtacggaaaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgctgacgctgccctgggcaaagccttc
atcaccgtgaacaagaactccgtgccgaacgatccacgttcgccgttcgtcacctccggc
ctgcgcttcggcaccccggctgtgaccactcgtggcttcaaggaagcagagtgcaaggaa
ctggcgggctggatctgcgacatcctggcagacctgaacaacgaagccgtgatcgacgcg
gttcgtgagaaggtcaaggccatctgcaagaagctgccggtgtacggcgcttga
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