Pseudomonas gorinensis: U771_28195
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Entry
U771_28195 CDS
T02969
Name
(GenBank) type IV secretion protein Rhs
Organism
psk
Pseudomonas gorinensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
Tox-ART-HYD1
OCRE
Motif
Other DBs
NCBI-ProteinID:
AHC38112
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All DBs
Position
6185096..6189700
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AA seq
1534 aa
AA seq
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MTNASHIAHIEHELDSFHQSLVTYRQQLGAWYSRALDSVSHAADLPSLLGMDRVLRAGNS
QRSVSLSDTDFSTVARCPAGGVLQIESKFESVYDVPIGDIPVEVIGLDDGSSTVVMLDEQ
GKGSHPCVAGARYQVRVQGGVSAQQVDALFVSYAGLTADLEQWLRSQWEGFKPHWQQSTA
SAIGSGILAGSWAAIREVWDSIQLVQAILEDPLKYVEQLGAEAAKLADLAASAPKVMEQA
MLLASDEAALFLLVRTAMIWLDALPPSEIAQVAAGFVVSLLIDLVMGAVLTIALPAAAVA
YLSLRLARYGAQMVKAAVGFVQGVLAILTKFMQAVDRYKAVAVRGVVGGLKQGTLQMRWR
ARQNTVLKQKEHVDDAPLSGKNPAGDAAASSDKTVTNGCPVSMVTGEELLTLTDGTLDGI
LPFEWTRLYRTSAVEVDCGLGFGWSHSLAHRLSVVGDSVVWIDHENRTTEFPLPTAARPA
ITNSLAEAAIYLGASPDELVLAQAARFYHFRDGVLVSISDAYDNRLRIFRDVLGRIERLD
NGAGRSLFLRYERGRIVAVDYQVQRAKGHEPYVWVTEQHVVAYAYDDAGRLVSATNAVGE
SEAYRYDEQHVILERGLAGGASFFWAWERSGKAARCVRHWASFSQMDTRYVWSDDGRVTV
HNADGSQEVYVHDHRARLVQRIDPDGAQHFKSYDDKGRLTVEQDPLGAVTAYQYDEAGRL
VALFPGDDEPTSYEHDNSFVRVVRRGLAVWKYERNDQGDVIRKTDPDGHVTDYSYDQYGQ
LVGVWYPDHSCQRLVWNERGQLLEQTLPNGGVRRYRYDDLGRQIAREDEHGALTQYQWDA
AGRLVKLTQPDGATREYSYNPYGKITAERDELGRVTRYEYADGLHLISRRINADGTQVHY
RYDNARLLLTEIENEVGETYRLDYHPNGLIQQEVGFDGQRSAYAYDLNGNLQEKTEHGDD
GSQLVTRYERDHAGRLVRKTLPDGNLVEYTYDRQGNLLSVDDGHWALAYEYDSQNRLTAE
HQGWGTLRYGYDACGQLQNLRLPDNNRVVFNHSKGGHLATVELNGALLTSHLFKAGQEHQ
RQQGQLLSHYHYDEQHRLHAHTVAQQDTHLYQRHYDYDKTGNLTRLVDSRKGEHHYHYDP
LARLTRADHTQAPHERFAHDPAGNLLMQDRPGPDIVAGNRLMIQGDRHYDYDAFGNLIRE
RRGKDHQLVTEYRYDCQHRLIGITQPDGQTASYRYDPFGRRISKTVDNITTEFFWQGDKL
IAEHHAEKHRSYLYEPDSFRPLALLEGFGPKETKPYHYQLDHLGTPQELTAPDGEIVWSA
HYRAYGEITRFDIGTVDNPLRFQGQYFDQESGLHYNRHRYYNPDVGRYLTPDPVKLAGGI
NGYQYVPNPTGWVDPLGLNTCPGGDRCKPSVDAKNPKINANSNPGEPALPSASGEMVRVR
HYTNRKGLNGIEQDGEILALDNNRVYVERARSKILSAADVQKRYQVDISRGRDYVETDVP
KHMLKEKKNPRYGSLELTIWGNLKLINPTFVRRK
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcttcccacattgcccatatcgaacatgagctggatagcttccatcagagc
ctggtgacgtatcgccagcaactgggggcctggtattcgcgcgcgctggattcggtgagc
cacgccgctgatttaccgtcgttgctggggatggatcgggtgttgcgcgcggggaattcg
caacgttccgtgagcctttccgataccgacttctccaccgtggcccgctgcccggcgggc
ggtgtgttgcagatcgaaagcaagttcgagtcggtgtatgacgtgccgatcggcgatatc
ccggttgaggtgatcggcctggatgacggcagttctaccgtggtcatgctcgatgaacag
ggtaaaggctcacacccatgcgtcgcgggcgcgcgctaccaggtacgggtgcaaggcggc
gtgtcggcgcaacaggtggacgcgttgtttgtgtcctacgccgggctgaccgcagacctg
gagcaatggctgcggtcgcagtgggaagggttcaagccgcattggcaacagtcgacggcc
agcgcgattggcagcgggatattggctggcagttgggcggcgattcgcgaggtgtgggac
agcatccagctggtgcaggcaattcttgaagacccgttgaagtacgtcgaacagcttggc
gccgaagcggccaaactggcggatttggccgccagcgcccccaaggtcatggaacaggcg
atgttgctcgccagtgatgaagcggcgctgttcctgctggtgcgcacggcgatgatctgg
ttggacgcattgccgcccagtgagattgcgcaagtggcggctgggtttgtggtgtcgctg
ctgatcgacctggtgatgggtgcggtgctgaccatcgcattgccggcggcggctgtggcg
tatttgagcctgcggctggccaggtatggcgcgcagatggttaaggcggcggtgggtttt
gttcagggcgtgctggcgattctgacgaagttcatgcaggcggtggatcgctacaaagcg
gtggcggttcgcggcgtggtcggcgggctcaagcaaggcacgctgcagatgcgctggcgg
gcgcggcagaacacggtgctgaagcaaaaagagcacgtggatgatgcgcctctttcgggg
aaaaaccctgcgggggatgctgccgcgtcttcggataaaaccgtaaccaacggctgcccg
gtgtcgatggttaccggcgaggagctgctcaccctcaccgatggcacgctggacgggatc
ttgccgttcgagtggacccggttgtaccgcaccagtgcggtggaagtggattgcgggttg
gggtttggctggagtcattcgctggcgcacaggctttctgtggtgggcgattcagtcgtc
tggattgaccatgaaaaccgcacgactgagttcccgctgcccaccgcggctcgccccgcg
atcaccaacagcctggctgaagcggcgatctatctgggcgcttcgccggatgaactggtg
ctggcccaggcggcgcggttttatcactttcgcgacggtgtattggtctcgatcagtgac
gcgtatgacaaccgcctgcgaattttccgcgacgtattggggcgcattgagcggttggat
aacggcgcgggccggtcgctgtttttgcgctatgaacggggccgcattgtggcggtggac
taccaggttcagcgcgccaaggggcatgaaccctacgtctgggtgacggagcagcacgtt
gttgcctacgcctatgacgacgctggacggctggtctcggcgaccaatgccgtcggcgaa
agcgaggcgtatcggtacgacgagcagcacgtgattcttgagcgtggcttggccggtggg
gcgagtttcttctgggcgtgggaacggtctggcaaggcggcgcgatgtgtccggcattgg
gccagcttttcgcagatggacacgcgctatgtgtggagtgacgacgggcgcgtcacggtg
cacaacgccgatggcagtcaggaagtgtatgtccatgaccaccgggcgcggctggtgcag
cggattgatccggacggtgcgcagcacttcaaatcctacgatgacaaaggtcggctgacg
gtcgagcaggacccgttgggggcggtgacggcgtatcagtacgatgaagccgggcgcttg
gtcgcgctgtttccgggggatgacgagccgacgtcctacgagcatgacaatagcttcgta
cgggttgtaaggcggggtctggcggtctggaagtacgagcgcaatgaccagggcgatgtc
attcgtaagaccgatcccgatgggcatgtcaccgactacagctacgaccaatacggacaa
ctggttggggtttggtacccggatcacagctgccagcggctggtgtggaatgagcgcggg
caactgctggagcagacgctgcccaatggcggtgtgcggcgctatcgctatgacgacttg
ggtcgacagattgcccgcgaggatgagcatggcgcgctgacccagtaccaatgggatgcc
gccgggcgcctggtcaagctaactcaaccggacggcgctacgcgcgaatacagctacaac
ccctacggaaaaatcaccgccgaacgcgatgaactcgggcgcgtcacccgctacgaatac
gccgacggcttgcacctgatcagccgccgtatcaatgccgatggcacccaggtccactac
cgctacgacaacgcccggctactgctgaccgagatcgaaaacgaggttggcgagacctac
cggctcgactaccaccccaacgggctgattcaacaggaagtcgggtttgatgggcagcgt
agcgcttacgcctatgacctcaacggcaacctgcaggaaaagaccgaacacggcgacgat
ggcagtcagctcgttactcgttatgagcgagaccacgccggtcgcctcgtacgaaaaacc
ctgcccgacggcaaccttgttgaatatacctacgaccgccaaggcaacctcctcagcgtc
gacgacggtcactgggcgctagcctacgaatacgatagccaaaaccgtctcaccgccgaa
caccaaggctggggcaccttgcgctatggctacgatgcctgcggtcaacttcaaaacctg
cgcctgcccgacaacaaccgcgtggtgttcaaccacagcaaaggcggccacctcgccacc
gtcgagttaaatggcgcactgctgacctctcatctattcaaggccggccaagaacaccaa
cgccaacagggccagctcctcagccactaccactacgacgaacaacaccgcctgcacgcc
cacaccgtcgcgcaacaggacacccacctttaccagcgccactacgactacgacaaaacc
ggcaacctcacccgtttagtcgacagccgcaaaggcgaacaccactaccactacgacccc
ctcgcccgcctcacccgcgccgaccatacgcaagccccgcacgaacgcttcgcccacgac
ccggccggcaacctgctcatgcaagaccgccccggccccgacatcgtcgccggcaaccgc
ctgatgatccagggcgaccgccactacgactacgacgccttcggcaacctgatccgcgaa
cgccgcggcaaagaccatcaactcgtcaccgagtatcgctacgactgccagcatcggctg
atcggcattacccagcccgacggccaaaccgcgagctatcgctatgacccgtttgggcgg
cgcatcagcaagacggtcgacaacatcaccacggagtttttctggcaaggcgacaaactc
atcgccgagcaccacgccgaaaagcatcgcagctatctctacgaaccggacagcttccgc
ccactggcgctactggaaggcttcggtccaaaagaaacgaagccttatcactaccaactc
gaccacctcggcacaccccaggagctcaccgcccccgacggtgaaatcgtctggtccgcc
cactaccgcgcctacggcgaaatcacccggttcgacatcggaacagtcgacaacccactg
cgttttcagggtcagtactttgatcaggaaagtgggctgcactacaaccgccatcgctac
tacaatccggatgttggtcgttacctgacaccggatccggtgaagttggcgggtgggatc
aatgggtaccagtacgtgcctaaccctacggggtgggttgacccgttgggactgaatact
tgtcccggtggagacagatgcaagccatctgtcgatgccaaaaatccgaagataaatgct
aactccaatccgggcgaacctgccctgccatccgcatcaggagagatggtcagggttaga
cactacaccaataggaagggattgaatggaatagagcaagatggagaaattttagcgctt
gacaacaatagagtttacgtagaacgagcaagaagtaagattctaagcgctgctgatgta
caaaagcgctatcaggtcgatataagccggggtcgagactacgtagaaactgacgttccg
aaacacatgctgaaagagaagaaaaacccaaggtacggctcgttagagctgacaatttgg
ggaaatctaaaattaataaatcctactttcgtcaggagaaagtga
DBGET
integrated database retrieval system
