KEGG   Pseudomonas sp. TKP: U771_28280
Entry
U771_28280        CDS       T02969                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psk  Pseudomonas sp. TKP
Pathway
psk00740  Riboflavin metabolism
psk01100  Metabolic pathways
psk01110  Biosynthesis of secondary metabolites
psk01240  Biosynthesis of cofactors
psk02024  Quorum sensing
Module
psk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    U771_28280 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U771_28280 (ribD)
Enzymes [BR:psk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     U771_28280 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     U771_28280 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AHC38129
LinkDB
Position
complement(6203998..6205134)
AA seq 378 aa
MNPPSAEQAVLDAHYMARALELARNGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHA
EVHALRAAGGKARGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRG
MQRLAQAGIEVYSGVLEGEARALNKGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWI
TGPAARAAVQRLRAQASVVLTGADTVLADGARLTVRAAELGLDDATTALAMSRPPLRVLI
DGRLRVPLNAPFFKAGPALVITCVTAENQFPRGPECLVVPGVDGQVDLRSALVALAARGV
NEVLVEAGPSLAGAFAQQGLVDEYVIFVAGKFLGSAARPLLDWPLEKLADAPQLKITEMR
AVGDDWRVTAIPLPPARV
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaacccaccttctgctgaacaggctgtcctcgacgctcactacatggcccgcgccctc
gaattggcgcgtaatggcctgtacaccacccatcccaacccgcgagtgggctgcgtgatt
gtgcgtgatgggcaggtcgtcggcgaaggctggcatgtgcgcaccggcgagccccatgcc
gaagtgcatgccttgcgcgctgcggggggtaaagcccgaggcgccacggcctatgtgacc
ctcgagccttgcagccactatggccataccccgccttgcgccgacgcactggtgagtgcc
gggctggcgcgggtggtcgcggcgatgcaggaccctaacccggaagttgccgggcgcggc
atgcagcgcctggcccaggccggtatcgaggtctacagcggtgtgctggaaggggaagcc
cgcgccctcaataaaggcttcctcaagcgcatggagcacggcctgccgtttgtgcgggtc
aagctggcgatgagcctggatggccgcactgcgatggccagcggcgagagccaatggatc
accgggcccgccgcccgcgccgcggtacagcgcctgcgcgcccaggccagtgtggtgctg
accggcgccgacacggtattggccgacggtgcgcgcctgaccgtgcgcgccgccgaattg
ggcctggatgacgccaccaccgccctggccatgtcacgcccgccgttgcgcgtgctgatc
gacggccgcctgcgggtgccgctcaatgcgccgttcttcaaggccggcccggcgctggtc
attacctgcgtcactgcggaaaaccagttcccccgtggccccgaatgcctggtggtgccc
ggcgtcgatggccaggttgacctacgctcggcgctggtggcgctggcggcccgtggcgtc
aatgaagtgctggtggaggccggcccaagcctggcgggtgcatttgcccagcagggcctg
gtcgacgaatacgtgattttcgtcgccggcaagttcctcggctccgccgcccggcctttg
ctggactggccgcttgagaaactggcggatgccccccaactcaagatcactgaaatgcgc
gctgtaggcgacgactggcgagtcactgccatcccgcttccacccgcgcgcgtataa

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