Pseudomonas gorinensis: U771_29105
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Entry
U771_29105 CDS
T02969
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psk
Pseudomonas gorinensis
Pathway
psk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U771_29105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psk03021
]
U771_29105
Transcription machinery [BR:
psk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U771_29105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_17
HTH_24
Sigma70_ECF
BrxR_CTD
HTH_29
Sigma70_r3
MerR
PCI
Motif
Other DBs
NCBI-ProteinID:
AHC38284
UniProt:
A0ACA7PEV8
LinkDB
All DBs
Position
6373793..6374269
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AA seq
158 aa
AA seq
DB search
MYRDHRSWLLAWLRRNVACPSRAEDLSQDTFMRLLCRAELREPREPRAFLVAIAKGLLFD
YFRRAALEQAYLTELMLIPESEHPSPEAQQLILEDLKAIDRLLGKLSSKARAAFLYNRLD
GLGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPL
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcgcgaccatcgcagctggctgctggcctggctgcgccgtaacgtggcctgcccg
agccgcgcagaagacctgagccaggacaccttcatgcgcctgctgtgccgtgccgagttg
cgtgaaccccgcgagccccgggcgttcctggtggcgatcgccaaaggcctgctgttcgac
tacttccggcgcgccgccctggagcaggcctacctcaccgaactgatgctgatcccggaa
agcgaacacccctcgccggaagcacagcagttgatcctcgaagacctcaaggccatcgac
cgcctgctcggcaagctgtcgagcaaagcccgcgccgcctttctctataaccgcctcgac
ggcctcggccacgccgaaatcgcccagcgccttggtgtgtcggtaccgcgggtgcgccag
tacctggcccagggcattcgccagtgttatatcgccctgtatggcgagccgttgtga
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