KEGG   Pseudomonas gorinensis: U771_29105
Entry
U771_29105        CDS       T02969                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psk  Pseudomonas gorinensis
Pathway
psk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U771_29105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psk03021]
    U771_29105
Transcription machinery [BR:psk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U771_29105
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_17 HTH_24 Sigma70_ECF BrxR_CTD HTH_29 Sigma70_r3 MerR PCI
Other DBs
NCBI-ProteinID: AHC38284
UniProt: A0ACA7PEV8
LinkDB
Position
6373793..6374269
AA seq 158 aa
MYRDHRSWLLAWLRRNVACPSRAEDLSQDTFMRLLCRAELREPREPRAFLVAIAKGLLFD
YFRRAALEQAYLTELMLIPESEHPSPEAQQLILEDLKAIDRLLGKLSSKARAAFLYNRLD
GLGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPL
NT seq 477 nt   +upstreamnt  +downstreamnt
ttgtatcgcgaccatcgcagctggctgctggcctggctgcgccgtaacgtggcctgcccg
agccgcgcagaagacctgagccaggacaccttcatgcgcctgctgtgccgtgccgagttg
cgtgaaccccgcgagccccgggcgttcctggtggcgatcgccaaaggcctgctgttcgac
tacttccggcgcgccgccctggagcaggcctacctcaccgaactgatgctgatcccggaa
agcgaacacccctcgccggaagcacagcagttgatcctcgaagacctcaaggccatcgac
cgcctgctcggcaagctgtcgagcaaagcccgcgccgcctttctctataaccgcctcgac
ggcctcggccacgccgaaatcgcccagcgccttggtgtgtcggtaccgcgggtgcgccag
tacctggcccagggcattcgccagtgttatatcgccctgtatggcgagccgttgtga

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