Pseudomonas gorinensis: U771_31170
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Entry
U771_31170 CDS
T02969
Name
(GenBank) type IV secretion protein Rhs
Organism
psk
Pseudomonas gorinensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
MsddA-like
DUF6531
RHS
PAAR_motif
TP_0579
Motif
Other DBs
NCBI-ProteinID:
AHC38698
UniProt:
A0ACA7PFM7
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Position
6819064..6823500
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AA seq
1478 aa
AA seq
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MSDALWAARMGDALTHTSMMADILGGVLEVAANVAITALATAAVAAAIGVTVATAGIGGC
ILGAVVGIVVGMAMSKTGADKGLSKMCESFANALFPPVVEATIAVGSADTFVNSIPAARA
AGSIPSHVAPAGTELELPPPEPDTAPQAEPGFLDMAEGFFSQLWRPTVATPAPGVVPALT
DMVLCARHPPMPPQLLAEGSDKVTINGQPAVRSGDRSMCDATVVSSGLISPNVTIGGGTV
VVQEIRSGKTPGVGLAIEVLMMLKGAKGKTLSDLPCMLLSGVTSYAVSQAMGAAANATMG
SPNPVHAATGAKVLGGNTEMDFVLPGILPITWQRFYNSRDKRRNGMFGAGWSVSYEVCIE
ILPHPDGGEDLVYTDEQARRIHLGAMPLGTAMFSAGEGLSIRRHRNGQVLIESEDGLYRL
FDSAPGDSAFLRLSQLGDRNDNRIYLDYDERGQLVRLRDTFDLIQIELTRERNRVCQIVR
VYPDHRREPLALYSFDAAGDLAHVSDATGQTQRRFAYDSSQRMVEHQLPTGLRCFYEWAL
IDQMEWRVIRHWTDEGDEYRFEYDLQAGITRITDSLQRVSTRLWNSQHQIVSYTDNLGQT
WLFEWNDERQLLSATDPKGGRYAFSYDDSGNLIGEHDPLGRSDSTVWLPHWALPRFQIDA
AGNSWTYQYDSRGNCIRETDPLGYSTQYRYDAHGQIVEIIDAAGKSKRMRWNQFGQLIEY
IDCSGYPTRFSYDERGFLQTITDALGERSHFSVDAKGRLLTSQSPDGQMDYFQRNANGQL
VSHTNAAGHTTHYRRNRRGQVSQRTDAHGRTVEFGYDAFGRLQALTNENGERYLFTWDAG
DRLEKQQDLDGSAKYYAYDTLDNLASVESVPALYGTGLSVVPPTRAKPIVHRLERDAIGR
LTAKVTDDGRTEYVYDVLNQLLAVTFTDHQGNSQALGFSYDALGQLLEEASPAGSLRHHY
DELGNLTQTQLPDGRWINRLFYGSGHLHQINLDGVIISDFERDRLHREVMRTQGQISTYL
GYDRSGRLRSRQRRYTQQASLLPSAEQSNFEYDLANNLALKRDQHAKGQRHQLLHYDATG
RIIASQGDIQGQAEIFAYDAAANLLDGSQQGAGLVVHNKLITYQDKRFRYDGFGRVIEKR
SSQRGLQSFRYDAEHRLIEVRNHGTAGDSVICMKYDPLGRRQEKCEWRNGFQTNKTTFLW
DGLKLLEEQHNSQKSLYLYATSGYEPLARVDGRGHQQKIRYYHNDVNGSPLQLTEADGSP
VWEATYKVWGNTLQEVQEPYYIEGQNLRYQGQYLDRETGLHYNTFRFYDPDVGRFTTRDP
IGLAGGLNLYQYAPNPIGWIDPLGLSCSLSAKARKIHDVARDPFAKRNSTVAIAEVTING
KTTHYVAGSGGTLSPAQRKLAAEMGIPPENILSGTKVRSSNADPTQAKLENHAERVIIRN
LPEGAKVEKWGVSWGGKQTNASCSNCQPHVDASGGIFD
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgttatgggctgcccggatgggcgatgcgctgacccacacctccatgatg
gccgacattcttggcggtgtgctggaggtggcggccaacgtggcgatcactgctctggcg
actgctgcggtggcggcggcgattggtgtgacggtcgctactgccggcattggtggctgc
atcctcggcgcggtagtcggcattgtcgtcggcatggccatgagcaagacgggggccgac
aagggcctcagtaaaatgtgcgagagtttcgccaacgcgctgtttccaccggtggtggaa
gccacgattgcggtaggctcggccgacactttcgtcaatagcatccccgctgcgcgtgcg
gcaggctccattccctcgcatgtggcgcccgcaggcacggagcttgaactcccgccgccg
gaacccgacaccgcgccacaagccgagcccggcttcctggatatggccgagggcttcttc
tcgcagctatggcggccgaccgtcgccacgcccgcgcctggtgtcgttccagccctcacc
gatatggtcctgtgcgcccgtcatccgccgatgcccccgcaacttctggcggagggttcc
gacaaagtaaccatcaacggccagcccgccgtgcgcagtggtgaccgcagcatgtgcgac
gcgacggtagtgtcctcgggcctgatctcgccgaatgtcacgattggcggcggtacggtg
gtggtacaggagattcgcagcgggaaaaccccaggcgttgggttggcgattgaagtgctg
atgatgctcaagggagcgaagggcaagacgctgagcgacctgccttgcatgttgcttagc
ggagtcacgtcctatgcggtcagccaggctatgggggcagcggcaaatgcaacgatgggc
tcgcccaatccggtacatgcggcgacgggagcaaaggtgctgggcggtaataccgaaatg
gatttcgtactgccagggatactgccgatcacttggcaacgcttttataacagccgggat
aaacgtcgcaacgggatgtttggcgcaggatggagcgtttcgtatgaggtctgcatcgaa
atcttgcctcacccagatggtggcgaagacctggtctacaccgacgaacaggcacgacgc
atccatctgggggctatgccgctgggtactgcgatgttcagtgccggcgagggcttgagc
attcgacgtcaccgtaacgggcaggtgctgatcgagagtgaagacgggctgtaccgcctg
ttcgacagcgcccctggagactcggcatttctgcgcctgagtcaattgggcgaccgcaat
gacaaccggatttatcttgattatgacgagcgaggtcaactggttcggctgcgagatacc
tttgacttgatacagattgaactgacgcgcgaacgtaatcgtgtctgtcagattgtccgc
gtgtaccccgaccaccggcgagaaccccttgccctttatagcttcgatgcagccggtgat
ctggcgcacgtcagcgatgctaccggccagactcaaagacgtttcgcttatgacagcagc
cagcgaatggtcgaacaccagttgcccacagggttgcgttgtttctatgagtgggcgttg
attgaccagatggagtggagggttatccggcattggacggatgaaggggacgagtacaga
tttgaatatgacctgcaagcgggcattactcggatcaccgacagcctgcagcgtgtcagc
acccggttgtggaatagccaacatcaaattgtctcttacacggacaacttgggccagacg
tggttgtttgagtggaatgacgagcgtcagttactcagtgcaaccgatccgaaagggggg
cgatatgcgttcagctatgacgattcgggaaacctgattggcgaacacgaccccttggga
cgcagtgactctaccgtgtggctgccgcattgggcgctgcctcgatttcaaattgatgcg
gcgggcaatagttggacgtatcaatacgactcacgcggaaactgcatccgagaaactgac
ccattgggctatagcacgcagtaccgttatgacgctcatgggcagatcgtagaaatcatt
gatgccgcgggcaaaagcaaacgaatgcgctggaatcaattcggccagctcattgagtac
attgactgctcgggctacccgacacggttcagctatgacgaacgtggctttttgcagacg
attaccgatgcgctgggagaacgctcccatttcagtgttgatgccaaaggacggctgcta
accagccaatcacccgacgggcagatggactattttcagcgcaatgcaaacgggcaattg
gtcagccacaccaacgctgccggccataccacgcactatcgacgcaaccgtcgcgggcag
gtgtcacagcgcacagatgcccacggtcgtacggtcgagtttggctacgatgccttcggg
aggctgcaggcgctgaccaatgaaaatggcgaacgttatctgtttacctgggacgccggt
gaccggcttgagaaacagcaggatctcgacggcagtgccaagtactacgcctacgatacg
ctggataacttggccagcgtggaatctgtgcccgcactttatggcacagggctttcagtt
gtaccgcccaccagggctaaacctattgttcaccggctggagcgggatgcaatcgggcgc
ctgacagctaaagttaccgacgatggccggaccgaatacgtttatgacgtactcaaccaa
ttgctcgcagtgacgtttacggatcaccaaggcaattcgcaagcgctgggcttttcgtat
gatgcactcggccaacttctggaggaggccagcccagctgggagtttgcgccatcattac
gatgagttgggtaacctgacacaaacccaattgcccgacggacgctggataaatcgattg
ttctacggcagtggccacctccatcaaatcaacttagacggcgtcatcatcagtgacttt
gagcgcgaccgcttgcatcgcgaagtcatgcgtacccaggggcagatcagtacttacttg
gggtatgaccgcagtggcaggttaaggtctcgtcaacgcagatacacgcaacaggcgtcg
ctgttgcccagtgcagagcaaagcaacttcgaatacgacctcgcaaacaacctggcctta
aagcgagatcaacacgccaagggacagcgccaccagcttctgcattacgacgctacgggg
cggattattgccagccagggcgatatccaaggacaagcagaaatattcgcttatgacgcg
gcggcaaatctgctggatgggtcgcaacaaggagcaggcctggtcgtacacaacaaatta
atcacctatcaagacaagcgcttccgttacgacggatttggccgggtgatcgaaaaaaga
agcagccaacgcggtctacagagcttcagatacgacgctgagcatcgcctgattgaagtt
cgaaatcacggtactgctggggactccgtgatttgcatgaagtatgaccctttgggcagg
cgtcaggaaaaatgtgagtggcgcaatgggtttcagacaaacaaaaccacgttcttatgg
gacggtttaaaactactcgaggagcaacataacagtcagaaaagcttatacctgtatgcc
accagcggatacgagcctttggcgcgtgtcgatggccgcggtcaccagcaaaaaatcagg
tattaccataacgacgttaatggatcgcccctacaactgactgaagcggacggaagccct
gtctgggaggccacttataaagtttggggcaataccctccaagaagtgcaagaaccgtat
tacatcgaagggcaaaacctgagataccaaggccagtacctcgatagagaaaccggtctg
cactacaacacgttccgcttttacgaccctgatgtagggcggtttaccacccgggaccct
atcgggctggcaggcggactcaatctctaccagtacgcgcccaatccgattggctggatc
gacccgctgggattaagttgctccctcagtgccaaggctcgaaaaatacatgacgtggcg
agagatccgttcgccaaacggaattcaaccgtcgccatcgcggaggtcacgatcaatgga
aaaactacacattacgtggctggcagcggcggcacactctcccctgcacaaagaaaactc
gccgctgaaatgggtataccacctgaaaacatattgtcaggcacgaaggtacgaagcagt
aacgcggacccgacacaggcgaaactggaaaaccatgctgaacgggttatcatcagaaac
ctgccagaaggtgcaaaagtcgaaaaatggggcgtgtcgtggggtggtaaacaaaccaac
gcatcctgttcaaattgccagcctcatgtggatgcttccggcggcattttcgattaa
DBGET
integrated database retrieval system
