Pseudomonas gorinensis: U771_31425
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Entry
U771_31425 CDS
T02969
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk03420
Nucleotide excision repair
psk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U771_31425 (uvrD)
03430 Mismatch repair
U771_31425 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_31425 (uvrD)
Enzymes [BR:
psk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U771_31425 (uvrD)
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U771_31425 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
U771_31425 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHC38748
LinkDB
All DBs
Position
6883832..6886015
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACARAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCSEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETPFSLGQQVKHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtccccgcactccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggtatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaggccgggctcgcccagacgttccagatcctcgacagcgatgac
cagcaacgcctggtcaagcgcgtgatccgcgaactggggctcgacgaacagcgctggcct
gcgcgccaggcccagtggtttatcaacggccagaaagacgagggcctgcgcccgcagcat
atccaggccagcggcgacctgttcctggccaccatgcgcagcatttatgaagcctatgag
gccgcctgcgcgcgtgccggcgtgatcgacttctccgagttgctgctgcgcgccctcgac
ctgtggcgcgacaacccaggcttgctggcccattaccagaagcgcttccggcatatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgttggccaaa
ggcggcgacagcctgatggtggtgggcgacgacgatcagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttccccgacgcggtcaccattcgc
ctggagcagaactaccgctccaccgccggtatcctcaaggctgccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggtggcgaaggcgaagcgatc
aacctgtacgcggccttcaacgaacacgatgaagcacgctacgtggtggaaaccatcgag
agcgcgctgaaaaccggcctggcgcgcagtgatatcgcgattctgtaccgttccaacgcc
caatcgcgggtattggaagaagccctgctgcgcgagcgcatcccgtaccgcatctatggc
ggccagcgcttcttcgagcgtgcggaaatcaagaacgccatggcctacctgcgtttgctc
gaaggccgcggcaacgatgcggcgctggagcgggtgatcaatatcccggcccgtggcatc
ggcgagaaaaccgttgaagccattcgcgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaacaaaggcttgaccggccgggctgccggggcgttg
ggggtgtttgtcgagctgatcgagaacctggcggccaaatgttcggaaatgccgctgcat
ttgatgacccagaccgtcattgaacagtccgggctgattgcctatcacgaagccgaaaag
ggtgaaaaaggccaggcccgggtagaaaaccttgaggaattggtcagcgccgcccgtgca
tttgaaaacaccgaggaagatgaagagctgaccccgctcgcagccttcctcggccacgcc
tcgctggaggcgggtgacacccaggccgacgagcacgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggagtttccctatgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagaacccggccgccttgaggaagaacgccgcctg
gcctatgtgggcattacccgggcgatgcagaacctggtgatgacctacgctgagacccga
cgcctgtacggcagcgagacctacaacaaggtgtcacgcttcgtacgtgaagtgccgaaa
gggctgatccaggaagtacgcctttccaacagcgtcagccgcccgttcggcggtggccag
cagcagaactccagcagcatgtttgcgggttccgagattccggaaacgccgttcagcctg
ggccagcaggtcaagcatgcgatcttcggcgaaggggtgatcctcaacttcgaaggtgcc
ggcgcccaggcacgggtgcaggtgaacttcgccgaaggcagcaaatggctgatgatgggc
tacgcgaaactcgaagcggtctga
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