Pseudoalteromonas sp. KAN5: KAN5_00380
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Entry
KAN5_00380 CDS
T10721
Symbol
rsmD
Name
(GenBank) ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pska03009
]
KAN5_00380 (rsmD)
Enzymes [BR:
pska01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
KAN5_00380 (rsmD)
Ribosome biogenesis [BR:
pska03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KAN5_00380 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_37
RsmJ
Methyltr_RsmB-F
PrmA
N6-adenineMlase
Methyltransf_15
Methyltransf_25
Methyltransf_4
Uricase
Motif
Other DBs
NCBI-ProteinID:
BDF93200
LinkDB
All DBs
Position
complement(42662..43261)
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AA seq
199 aa
AA seq
DB search
MRNKSPQKQMSNKTNDGVIRIISGQFRGRKLPVKDVQGLRPTTDRIKETVFNWLMQDTRD
AKVLDCFAGSGGLGFEALSRFAQSACFLEMDKLAATQLKANIETLKLTNAEVVCTDSLQF
LSKNPHQQQFNLVFIDPPFRQGLAQQCCDLLTHNAWLDKNALIYVEVESDMPALHTPSNW
LLLKEKVAGQVLSRLYELQ
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataaatcaccacaaaaacaaatgagtaataaaactaatgatggcgttattagg
atcattagtgggcaatttcgtggccgaaaactacctgtaaaagatgtgcaaggcttgcgc
ccaaccacagaccgcatcaaagaaacggtctttaactggttaatgcaagatacacgtgat
gccaaagtactcgattgttttgcaggatcgggcggattagggtttgaagcattatctcgc
tttgctcaatcggcctgctttttagaaatggacaaactcgctgcgacgcaactaaaagcc
aatatagaaacgttaaagctcactaatgcagaagttgtgtgtactgacagtttacaattt
ttaagtaaaaatccacatcagcaacaatttaatttagtgtttattgacccaccatttcgt
caaggtctggcacaacaatgctgtgatttactcacacataatgcttggttagataaaaat
gctcttatttacgtcgaagtagaaagcgacatgccagcattacacacaccaagcaattgg
ctgttactaaaagaaaaagtagctgggcaagtactttcccgcctctatgaattacagtga
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