Pseudoalteromonas sp. KAN5: KAN5_06060
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Entry
KAN5_06060 CDS
T10721
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pska03016
]
KAN5_06060 (truB)
Enzymes [BR:
pska01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KAN5_06060 (truB)
Transfer RNA biogenesis [BR:
pska03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KAN5_06060 (truB)
Prokaryotic type
KAN5_06060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDF93768
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All DBs
Position
706846..707796
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AA seq
316 aa
AA seq
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MARRSKGRAIDGILLLDKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKEVNVSEEQLSSEIAKFLGESDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEANNEVQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPADKMVSLTQLEALLAKAKEQELSPSTYLDE
LLLPMDSALVDLPVVEITKEQGVSFGHGQAVVLGVELPEGAIKVLADGVFIGTGEKNPDG
HLKSKRGLSNQQEATE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgcgcaattgacggcattttattactagataagccacaa
ggtatttcgtcaaataaagctttgcagcaagcaaagggcatctattttgcgcaaaaagca
ggtcatacaggtgcgcttgatccgttagcaacgggtatgttaccgatttgctttggtgaa
gcgacaaagtttactcagttcctacttgatactgataaaacatacgttgtgcgtgcgaaa
ctaggtgaacgtacaacaacctctgattctgacggtgaaattgtcagtacaaaagaggtt
aatgtaagcgaagagcagttgagtagtgaaattgcaaaatttttaggtgagtctgatcaa
tacccttctatgtattcggcgctaaagtatgaaggaaaacctttgtataagtatgcccgt
gaaggcattgaagtgcctcgtaagtgtagaaaaatcaatgtatttagtttaacgcttgat
gagtttgatgaagcgaataatgaagtacaaatgaccgctcatgtatcaaaaggcacttac
attcgtactattgttgacgatttaggtgagaacctcggctgtggcgcacatgttattatg
ttacatcgtagtgctgtgggacattaccctgcagataaaatggtgtcattaacgcagtta
gaagcgctccttgctaaagcaaaagagcaagaactgagcccatctacttatcttgatgaa
ctgttattacctatggatagcgctttagttgacttacccgttgttgaaataaccaaagag
cagggggtttcctttggccatggtcaggctgttgtacttggtgtagaactacctgaaggg
gccattaaagtgttggcggatggtgtgttcatcggcacgggtgagaaaaaccctgatggc
catttgaagtcaaaacgcggcttatcaaatcaacaagaagcgactgagtaa
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