Pseudoalteromonas sp. KAN5: KAN5_10730
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Entry
KAN5_10730 CDS
T10721
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pska03032
]
KAN5_10730 (ihfB)
03036 Chromosome and associated proteins [BR:
pska03036
]
KAN5_10730 (ihfB)
03400 DNA repair and recombination proteins [BR:
pska03400
]
KAN5_10730 (ihfB)
DNA replication proteins [BR:
pska03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KAN5_10730 (ihfB)
Chromosome and associated proteins [BR:
pska03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KAN5_10730 (ihfB)
DNA repair and recombination proteins [BR:
pska03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KAN5_10730 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PqqD
HU-CCDC81_bac_2
HU-CCDC81_euk_2
FliG_C
Motif
Other DBs
NCBI-ProteinID:
BDF94235
LinkDB
All DBs
Position
1260126..1260413
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEQLAEQHAHVPVKDVENAVKEILEQMAGSLSSSDRIEIRGFGSFSLHFRSPRT
GRNPKTGDTVELEGKHVPHFKPGKELRDRVNASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaattgatagaacaattagccgagcaacatgcacatgtccctgtgaaa
gatgttgaaaatgctgttaaagaaattcttgaacaaatggccggctcattatcaagctca
gatcgcatcgagatccgtggctttggtagtttctcattacactttcgttcaccgcgcact
ggtcgtaaccctaagacgggcgacactgttgagcttgaaggtaagcacgtaccacatttt
aaaccaggcaaagaattacgagatcgcgtaaacgcgagtattgcctag
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