Pseudoalteromonas sp. KAN5: KAN5_16880
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Entry
KAN5_16880 CDS
T10721
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska00541
Biosynthesis of various nucleotide sugars
pska01100
Metabolic pathways
pska01250
Biosynthesis of nucleotide sugars
Module
pska_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KAN5_16880 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pska01005
]
KAN5_16880 (kdsA)
Enzymes [BR:
pska01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KAN5_16880 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pska01005
]
Lipid A
KAN5_16880 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDF94850
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Position
complement(1952305..1953159)
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AA seq
284 aa
AA seq
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MNNHLIKINDIELANEKPFVLFGGMNVLESRDLAMRIAEHYVEVTTKLNIPYVFKASFDK
ANRSSINSYRGPGMEEGLRIFEEIKKTFNVPLITDVHEPHQAAPVAEIVDIIQLPAFLAR
QTDLVVAMAKTGAIVNVKKPQFLAPHEMRHIITKFNEAGNNNVILCERGSSFGYNNLVVD
MLGMDDMKPMAPVIFDATHALQRPGGRADSADGRRAQAAELARSGMALGIAGLFIEAHPN
PNEAKCDGPCALALSKLEGYLSQMKAVDDLVKSFAPLDTSASDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccatttaataaaaattaatgatattgaattggcaaacgaaaagccgtttgta
ctgttcggtggcatgaatgttttagaatcacgcgatctagcgatgcgtattgctgagcat
tatgttgaagtgaccactaagcttaatattccttatgtgtttaaagcctcgtttgataaa
gcaaaccgctcatcaatcaactcatatcgtggaccgggtatggaagaaggtttacgaatt
tttgaagaaattaaaaaaaccttcaatgtacctttgatcaccgatgtgcatgaaccacat
caagccgctcccgtcgctgaaatagttgatattattcaattaccggcctttttagcacga
caaactgatttagtagtagcaatggcgaaaactggtgcgattgttaacgttaaaaaaccg
cagtttttagccccacatgaaatgcgtcacatcattactaaatttaatgaagcggggaat
aacaatgttattctgtgtgagcgtggctcgagttttggttataacaacctagtggttgat
atgcttggcatggatgacatgaagccaatggcgccggttatctttgatgcaacgcatgca
ttacaacgcccaggcggacgtgcagattcagcggatggtcgccgtgcacaagcggcagaa
cttgcccgtagcggtatggcattaggtattgccggtttatttatcgaagcgcatccaaat
cctaatgaagcgaaatgtgatggcccatgtgcattggctttaagtaagctggaaggctat
ttaagtcaaatgaaagcggttgatgatttagttaaaagctttgcaccgcttgatacaagt
gccagcgatttataa
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