Pseudoalteromonas sp. KAN5: KAN5_19190
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Entry
KAN5_19190 CDS
T10721
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAN5_19190 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pska03019
]
KAN5_19190 (rppH)
Messenger RNA biogenesis [BR:
pska03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KAN5_19190 (rppH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Tautomerase_2
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
BDF95081
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Position
complement(2204470..2204991)
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AA seq
173 aa
AA seq
DB search
MIDAEGFRANVGIVICNNQGQVFWARRYGQHSWQFPQGGVDSGETAEQTMFRELHEEVGL
RPEDVEIVASSKHWLRYKLPKRLIRRDSSPVCIGQKQKWFLLKLRCKDEDVNLLKTHHPE
FDDWRWVSYWYPVRQVVSFKRDVYRRVMKEFAPFAMPFNKREQPKDTWRHKGK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgccgaaggttttcgtgccaatgtcggaattgtaatttgcaataatcaggga
caggtcttttgggccagacgttatggtcaacactcttggcagtttccgcaagggggagtt
gatagcggtgaaaccgctgagcagacaatgtttcgtgagttacacgaagaagttggctta
cgccctgaagatgtagaaattgttgcaagttcaaaacattggttacgctataaattaccc
aagcgattgatccgccgagactcaagtccggtgtgtattgggcaaaaacaaaaatggttt
ttacttaaacttcgttgtaaagacgaagacgtaaatttactaaaaacacatcatcctgag
tttgatgattggcgatgggttagttattggtatccggtaaggcaagttgtctcgttcaag
cgcgatgtttatcgtcgtgtaatgaaagagtttgcacctttcgcgatgccttttaataaa
cgtgaacagccaaaagatacatggcgccacaaaggtaaataa
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