Pseudoalteromonas sp. KAN5: KAN5_22040
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Entry
KAN5_22040 CDS
T10721
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
Transcription machinery [BR:
pska03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KAN5_22040 (rapA)
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GFIT
Other DBs
NCBI-ProteinID:
BDF95366
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Position
2524632..2527526
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AA seq
964 aa
AA seq
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MNFSLGQRWISDTESDLGLGTVVALEGRQVSILFPASGENRVYSMLEAPVTRVAFNPGDV
IKSVEEWELTVESIETIGDLLCYHGTRVDNGEPAQLKETFLDHFIKFNKPQDRLFAGQVD
RFDRYTLRYQTWQHQFERQQSPIKGLIGQRASLIPHQLYIAQEVGKRFAPRVLLSDEVGL
GKTIEAGMILHQQIISGRASRVLIVVPENLQHQWLVEMLRRFNLHFSIFDEERCDEAFAD
SPNVFDTEQLVLTSLEFLAKKKRWFEQATMADWDLLIVDEAHHLSINNGKPSTEYLRMAE
LSQDIPGLILLTATPDQLGHRSHFARLQLLDPDRFYDYDAFVAEESNYKHVAEAANQLLQ
EQALDDSAKATLIALLKETDITTLLEQAQNGDTAARKEILAMLLDRHGTGRILFRNSRSG
IDGYPSRKLHAYPMAMPKQYKTAISVLGNMGGIQNAELSAQRALFPEKIFQEFEGESASW
GQFDPRVDWLINTLKTLKREKVLLICAKAETAISLEQILREREAIKASVFHEGMTIIERD
RAAAFFADEYDNAQILLCSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDRIGQTQ
DINIHVPYFENTAQEVLLRWYNEGLDAFETTSSTGQLLYKEFKDDLLDFIAAHNCDEDEL
EPLLEQVASQNAVLRKQMESGRDRLLELHSSGQGAADSLVVDIEKLDNQFELPSYMINVF
DTFGVSQEDKGENTIILKPTEHMLNPSFPSLKDDGMTVTFDRDTALAQEDVHFISWDHPM
VQGTLDMICDDDFGTASVALLKNKKLPPGTFFVELIYVATAMAPKALQVGRFLPPTPIRI
LLDKASNNLADNVGFDGFNQQLSAVGRQTASKLAGALQSAIHPMLKTAQEMAQTKLEGIR
TAALEQMQQSLSEEQARLAALKQINPNIREEELTFYDKQRTELENYIGKAQLQLDAIRLI
VVSH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttccttaggtcagcgttggatcagtgatacagagtcagatttaggattaggc
acagtcgttgccctagaaggccgtcaggtcagcattttatttcccgccagtggcgaaaac
cgtgtttattcaatgctagaagcaccggtaacccgcgtggcatttaatcctggtgatgtg
atcaaaagcgttgaagaatgggaacttacagtcgagtcaattgaaacaataggtgatctg
ctttgttatcacggcacccgtgttgacaacggcgagccagcacaattaaaagaaaccttt
ttagatcactttattaaatttaataagccgcaagaccggttatttgctggccaagtcgac
cgctttgatcgatacacattgcgctatcaaacctggcaacaccagtttgaacgccagcaa
tcgccaattaaaggcttaattggtcagcgcgcaagccttattcctcatcagctttacatt
gcccaagaagttggcaaacgctttgcgccacgcgtattactctctgatgaagtgggtctt
gggaaaaccattgaagcagggatgattttacatcaacaaatcattagcggccgcgctagt
cgcgtactgattgtagtacctgaaaacctccagcatcagtggctagtggaaatgctacgc
cgttttaatttgcacttttctatttttgatgaagaacgttgtgatgaagcatttgctgac
tcaccgaatgttttcgatactgagcaattagtacttaccagtcttgaatttttagcgaag
aaaaaacgctggtttgaacaagcgaccatggctgattgggatttattaatagttgatgaa
gcgcatcacttaagtattaataatggtaagcctagcactgaatacctgcgcatggcagaa
cttagccaagatattccaggcctgatattactgaccgcaacacctgatcaacttggtcac
cgcagccactttgcacgcttgcaattactcgacccagatcgtttttatgattacgatgcc
ttcgttgcagaagaaagtaactataagcatgttgccgaagctgccaatcaattgctgcaa
gagcaggcccttgatgacagtgcaaaagccacattaattgcgctattaaaagaaactgat
atcacaacacttcttgaacaagcacaaaatggcgatactgcggcccgtaaagaaatttta
gccatgttattagatcgacatggcacaggtcgtattttatttagaaatagccgtagcggc
attgatggctaccctagccgtaaactgcacgcatatccaatggccatgccaaaacaatat
aaaaccgccatttcggtattaggcaatatgggcggcattcaaaatgctgaacttagcgcg
caacgtgcccttttcccagaaaagatttttcaagaatttgaaggtgaaagcgccagctgg
ggacaatttgaccctcgtgtagattggttaatcaacacgctaaaaaccctaaaacgcgaa
aaagtgctgctgatctgtgctaaagcagaaacagccattagtcttgagcaaatattacgt
gagcgcgaagcaatcaaagcatccgtgttccatgaaggcatgacgattattgaacgtgac
cgggcagcggcgttttttgctgacgagtacgacaatgcgcaaatactgttatgttctgag
attggctctgaaggtcgtaacttccaatttgcccatcatttagtgttgtttgatttacca
ctaaaccctgatttacttgagcaacgtattggtcgtctagaccgtattggtcaaactcaa
gatatcaacattcatgtgccatacttcgaaaatactgcgcaagaagtattactgcgttgg
tataacgaaggcttagatgcctttgaaaccacctcaagcactgggcaattattatacaaa
gagttcaaagatgatctgcttgattttattgcagcgcataactgtgatgaagacgagcta
gagccattactcgagcaggttgccagccaaaacgccgtgctgcgtaaacaaatggaaagt
ggtcgtgaccgcttgctagagctacattcttcagggcaaggcgctgctgattcgctggtt
gtcgatattgagaaactagacaatcagtttgagcttcctagttatatgatcaatgtattt
gatacctttggtgttagccaagaagataaaggtgaaaataccattatcttaaaaccgact
gagcacatgttaaatccatcattcccaagtttaaaagacgatggaatgacagtgaccttc
gaccgagacactgcattagcgcaagaagacgtgcatttcatcagttgggatcaccctatg
gtacaaggtaccttagatatgatctgcgatgatgactttggaaccgcctcagtagcactg
cttaaaaataaaaaattaccccctggtactttttttgttgagctcatttatgttgctacc
gctatggcacctaaagccctgcaggttggtcgttttttaccgccaacgccaattcgtatt
ttgttagataaagccagcaacaacctagctgataatgtcggctttgatggttttaatcag
caactttcagcggtaggtcgccaaactgcgagcaaactagctggcgcattacaaagtgcg
attcacccaatgcttaaaactgcacaagagatggcacaaactaagttagagggcattcgc
acagcagctcttgagcagatgcagcaatcactcagtgaagagcaagctcgtttagcggca
cttaaacagatcaaccctaatattcgtgaagaagaactgaccttctacgataagcaacgc
acagagctggaaaactatatcggcaaagcacagttacaattagatgccattcgtttgatc
gtggtatcgcattga
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