Pseudoalteromonas sp. KAN5: KAN5_24780
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Entry
KAN5_24780 CDS
T10721
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pska01011
]
KAN5_24780
Enzymes [BR:
pska01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KAN5_24780
Peptidoglycan biosynthesis and degradation proteins [BR:
pska01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KAN5_24780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BDF95640
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All DBs
Position
2854039..2855535
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AA seq
498 aa
AA seq
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MIFMRSYLLAPLMLLLLLTGCQTTEQPVEPSDAPQAPIIFNHFKPTHTPQPLADSEQKKQ
TIKLKAPSQQATKESQASNRSQDLWQHIADKLTIKVYLNKALNKRISWYTKQPNYLQIVN
ERAAPYLYHIVSKIEQRKLPMELALLPFVESDFRPTISSSEQAVGVWQLVGATAHHFGIK
SDQWYDGRKDVLASTDAALAYLEYLYKQFDGNWLHALAAYNSGEGRVKRAIAENKKRGKS
TDYWTLKLPKETSEYVPKLLALSYLVKHPNRGLTRPKLANKALTTELNIGQQFDFSVIAN
LSGIGRNQLHKLNPGYLKNQSSPNGPHTLLLPLQQQSLLSSQFFKSNFAGEYTVKKDDTL
YSIARRFGLSVEKLKAINNKHSNLIGIGETLMIGQPRTMPDSLTIDYRISPYLEQNEMAI
PTIAIHYQVKPGDTIWGISQLYDVPHSDLAQWNQLNASSILTPGTQLVLHLPQATKTAPQ
IHNEGLLSELEKTLKQPH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttatgcgcagttatctcttagccccattaatgttgttactgttgcttactggt
tgccagacaacagagcaacctgtagagccaagtgatgcaccgcaagccccaattattttt
aatcactttaaaccaacacataccccgcagccactggctgacagcgaacagaaaaaacaa
acaataaaattaaaagcaccatcgcaacaagctacaaaagaatctcaagcaagcaatcgc
agtcaagacttatggcagcatattgctgataaattaaccatcaaagtgtatctaaacaaa
gctctcaacaaacgtatttcatggtataccaagcaacctaattacttacagatagtcaat
gaacgtgctgctccgtacctttatcatattgtcagtaaaattgagcaacgtaagttaccg
atggagttagccttgttaccttttgttgaaagcgactttaggcccaccatcagctcatct
gagcaggcggttggagtatggcaattagtcggtgcgacagcccatcactttgggatcaaa
tcagatcaatggtatgacggtcgcaaagatgtcttggcctcaaccgatgcagcactggcg
tatttagagtatttatataaacaatttgatggcaattggttgcatgcattagcggcctat
aatagtggcgaaggacgagtaaaacgcgcaattgccgaaaataaaaagcgcggtaaaagc
actgattactggactttaaaattaccaaaagaaacctccgaatacgtaccaaaactactt
gcactaagctacttagtaaaacacccaaaccgcggcttgactcgccctaagctggcgaat
aaagcactaacaactgaactaaatattggtcaacaatttgacttttcagtgatagccaac
ctatcaggcatcggtcgtaaccagttacataaactgaatccaggttatttaaaaaatcaa
agttctcccaacggcccacacactttattactcccattacagcaacaaagcttactaagc
agtcaattttttaagagtaattttgctggtgaatatacggtgaaaaaagatgacacctta
tattcaatagctcgccgctttggattatcggtggaaaaacttaaagctataaataataaa
cattccaacctaattggtattggtgaaaccctaatgattggacaacctcgcactatgccc
gattcattaacgattgattatagaattagcccttaccttgagcagaatgaaatggcgatc
ccaacgattgcgatccactatcaagtaaaaccaggcgataccatctggggaattagccag
ctatacgacgtgccgcatagtgatttagcgcaatggaatcaactcaatgcctccagtatt
ttaacaccgggtacgcaactggttttacatttaccacaagcaacgaaaacggctcctcaa
atacacaatgaaggtttactttctgaacttgaaaaaaccttaaaacaaccgcactaa
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