Pseudoalteromonas sp. KAN5: KAN5_25120
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Entry
KAN5_25120 CDS
T10721
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAN5_25120 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pska03019
]
KAN5_25120 (groL1)
03110 Chaperones and folding catalysts [BR:
pska03110
]
KAN5_25120 (groL1)
03029 Mitochondrial biogenesis [BR:
pska03029
]
KAN5_25120 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pska04147
]
KAN5_25120 (groL1)
Enzymes [BR:
pska01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KAN5_25120 (groL1)
Messenger RNA biogenesis [BR:
pska03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KAN5_25120 (groL1)
Chaperones and folding catalysts [BR:
pska03110
]
Heat shock proteins
HSP60 / Chaperonin
KAN5_25120 (groL1)
Mitochondrial biogenesis [BR:
pska03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KAN5_25120 (groL1)
Exosome [BR:
pska04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KAN5_25120 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
KAN5_25120 (groL1)
Exosomal proteins of breast cancer cells
KAN5_25120 (groL1)
Exosomal proteins of colorectal cancer cells
KAN5_25120 (groL1)
Exosomal proteins of bladder cancer cells
KAN5_25120 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDF95674
LinkDB
All DBs
Position
2887774..2889420
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVLFAGDARAKMLAGVNILANAVRVTLGPKGRNVVLDKSFGAPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAIIAAVAELKELSVPCADAKAIAQVGTISANSDKEIGDIIAEAMEKVGRNSGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPFILLVDKKVSNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATVEDLGTAKRVVITKDDTTIIDGAGEEDGINGRVAQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRAASKLAALTGDNEDQSHGIKVALRAMEAPLRQIVTNAGDEASVVINAVKGGTGNYGYN
AATGEYNDMIEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKDEAGAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtactttttgcaggtgacgcacgcgctaaaatgctagctggcgta
aacatcttagcaaatgcagttcgcgtaacgttaggtcctaaaggtcgtaacgtagtatta
gacaaatcatttggcgctccagtgatcactaaagatggtgtatctgtagcaaaagaaatc
gaacttgaagacaagtttgaaaacatgggcgcgcaaatggtaaaagaagttgcatctaaa
gcaaatgatgcagcgggtgacggtacaactactgccacagttttagcacaatctatcgtt
aacgaaggcttaaaagcggttgcggcgggcatgaacccaatggaccttaagcgcggtatc
gataaagcaatcatcgcagcagttgctgaacttaaagaactttctgttccatgtgctgat
gcaaaagcaatcgcacaagtaggtactatttcagctaactctgacaaagaaattggcgac
atcattgcagaagcaatggaaaaagtaggccgtaacagcggtgtgatcactgttgaagaa
ggtcaatcacttgagaacgaacttgatgttgtagaaggcatgcagtttgaccgtggttac
ctatcgccatatttcatcaacaacgcagaaaaaggcgctgttgaattagacaacccattc
attctacttgtagacaagaaagtatctaacattcgtgagttactacctacattagaagcc
gttgctaaagcaagcaagccactattgatcatcgctgaagaccttgaaggcgaagcactg
gcaacactagttgttaacaacatgcgcggtatcgttaaagtatcagcagttaaagcgcct
ggttttggcgaccgtcgtaaagcaatgctacaagatatcgcagtattaactggtggtacg
gttatctctgaagaaattggccttgaacttgaaaaagcaacggtagaagacttaggtact
gctaaacgcgttgtgatcactaaagatgatacaacgatcatcgacggtgctggcgaagaa
gacggcattaatggtcgtgttgcacaaatcaaagcacaaatcgaagaagcaacgtctgac
tacgataaagagaaactacaagagcgcatggcgaaacttgccggcggtgttgcagtgatc
aaagtaggtgctgctactgaaatcgaaatgaaagagaaaaaagaccgcgttgaagatgca
ttacatgcaactcgcgcagcggttgaagaaggcgtagtaccgggtggtggtgttgcacta
gtacgtgctgctagcaagctagctgcattaactggcgacaacgaagaccaaagccacggt
attaaagtagcactacgtgcgatggaagcaccacttcgtcaaatcgtcactaacgcaggt
gacgaagcgtctgttgttattaacgcagttaaaggcggcacaggtaactacggttacaac
gcagcaactggcgaatacaacgacatgattgaaatgggtatcctagatccaactaaagta
acgcgctctgcactacagtttgcaggctcgattgcaggtcttatgatcaccacagaagcc
atggtagctgaaatcccaaaagatgaagctggcgctcctgatatgggtggcatgggcggt
atgggtggcatgggcggcatgatgtga
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