Pseudoalteromonas sp. KAN5: KAN5_28000
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Entry
KAN5_28000 CDS
T10721
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska00071
Fatty acid degradation
pska00280
Valine, leucine and isoleucine degradation
pska00310
Lysine degradation
pska00362
Benzoate degradation
pska00380
Tryptophan metabolism
pska00410
beta-Alanine metabolism
pska00640
Propanoate metabolism
pska00650
Butanoate metabolism
pska00907
Pinene, camphor and geraniol degradation
pska00930
Caprolactam degradation
pska01100
Metabolic pathways
pska01110
Biosynthesis of secondary metabolites
pska01120
Microbial metabolism in diverse environments
pska01200
Carbon metabolism
pska01212
Fatty acid metabolism
Module
pska_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KAN5_28000 (fadB)
00650 Butanoate metabolism
KAN5_28000 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KAN5_28000 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KAN5_28000 (fadB)
00310 Lysine degradation
KAN5_28000 (fadB)
00380 Tryptophan metabolism
KAN5_28000 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KAN5_28000 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KAN5_28000 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KAN5_28000 (fadB)
00930 Caprolactam degradation
KAN5_28000 (fadB)
Enzymes [BR:
pska01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KAN5_28000 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KAN5_28000 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KAN5_28000 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KAN5_28000 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
BDF95962
LinkDB
All DBs
Position
3183471..3185630
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVAFIKDNIAEFKFCVAGSVNTLSQQTLKDCASALKELAANTDIKGMIFTSD
KEHFIIGADIFEFLPTFTKPETELVTWIKDATDVFDALEDLPFPTLSAINGLALGGGCEW
VLATDYRVASSTAKIGLPEVKLGIMPGFGGTVRLPRIVGADNAMLWITSGAENRAADALK
VGAVDAVVSADKLLDSGISTLELAIAGKLDWQAKRNVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPIMAVRTIKAAANCERAEAMAIENANFAKLARTPEAAAQTGIFLADQYIK
GKARKSAKTSDLEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGQKVQRGHMAMEKMVATLGKIKPTLNDSDLQSADIIVEAVVENPKVKQAVLAGLEKDMP
AGTILTSNTSTIRIDELATALEKPENFCGMHFFNPVPKMPLVEIIRGEKTSEQTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGADFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMSRQEKDPVTVFANEKRFGQKNKAGFYQYAPDRRGR
LKKAQDPQAVELLSSITDAPKEFDKQEIIDRCMVPMINEVLLCLQENIIASPQEADMALI
YGIGFPPFRGGAFRYLDQTGLANFVATADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttgctttcatcaaggataatatcgccgagttc
aagttttgtgttgccggctctgtcaacactttgtctcagcaaaccttgaaagattgcgcc
tctgcattaaaagaattagcagcaaatactgatatcaaaggcatgatttttaccagtgat
aaagagcactttattattggcgccgatattttcgaatttttaccaacgtttactaaacca
gaaactgaattagtaacctggatcaaagatgccacagatgtatttgacgcattagaagat
ttaccattcccaactttaagcgcaataaatggcttagcacttggtggcggatgtgagtgg
gtacttgctaccgattatcgcgttgcaagctctacagctaaaattggccttccagaagta
aaactaggcattatgcctggttttggtggcacagttcgcttaccacgcatcgttggtgcc
gataatgccatgctttggatcacctctggtgcagaaaaccgcgctgctgatgctcttaaa
gtaggtgctgttgatgcggtagttagtgctgacaaacttttagactcaggtatttcaaca
cttgaattagcaattgctggcaagctagattggcaagccaaacgtaatgttaagctgcag
ccacttaaattaaaccgcgttgagcaaggtatgagctttgcaatggctgaaggtatggta
atgggtaaaaccaaaggccactatcctgctccgatcatggcggttcgcactattaaagca
gcagctaactgtgaacgcgcggaagcaatggcaatcgaaaatgctaattttgctaaactt
gctcgtactccagaagctgccgcacaaacgggtatcttccttgctgatcaatacatcaag
ggtaaagcacgtaagtctgctaaaaccagtgatttagaaataaaacaagccgctgttctt
ggcgcaggtattatgggcggcggtatcgcttaccaatctgcttataaaggcacaccaatc
ataatgaaagacatccaacaagatgcacttgatttaggtatgggtgaagcatctaagcta
ttaggccaaaaagtacagcgcggtcatatggcaatggagaaaatggttgccacgttagga
aaaattaaaccaacccttaatgatagcgacttacaaagtgcagatatcattgtagaagcc
gtggttgaaaaccctaaagtgaagcaagcagttttagccggtcttgaaaaagatatgcca
gcgggcactattttaacttctaacacgtcaacgattcgtattgacgagctagcaacagcc
cttgaaaaacctgaaaacttctgtggtatgcacttctttaacccagtgcctaaaatgcca
ctagttgaaattatccgtggcgagaaaacttcagagcaaacaattaatgccgtagttgat
tacgccttaaaactaggtaagtcgccaattgttgtaaacgactgcccaggcttctttgta
aaccgcgttttattcccttactttgcaggctttagcaaattagttgttgaaggcgctgat
tttgcaaaagtagataaagtcatggaaaacgtatttggctggccaatgggccctgcctac
ttacttgatgttgtaggtattgatacggcttaccattgtactggcgttatggctgatggt
ttccctgagcgtatgtctcgtcaagaaaaagaccctgtgactgtattcgccaacgaaaaa
cgctttggtcagaagaacaaagcaggtttctatcaatatgcaccagacagacgtggccgc
ttgaaaaaagcccaagatccacaagctgttgaactacttagttctatcactgatgcgcca
aaagagttcgataaacaagaaattatcgaccgctgtatggtaccaatgatcaacgaagta
ctgctttgtttacaagagaacattattgcctcaccacaagaagctgatatggcgcttatt
tacggtattggtttccctccatttagaggcggtgcgttccgttacttagatcaaactgga
ctagctaattttgttgcaacagcagacaaatatgctcacctaggtgcgatttaccaagta
tctgagcaaactcgtaaatgggctgaagaaggccgtgttttctataaggtggaaggataa
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