Pseudoalteromonas sp. KAN5: KAN5_28410
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Entry
KAN5_28410 CDS
T10721
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pska01011
]
KAN5_28410
Enzymes [BR:
pska01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KAN5_28410
Peptidoglycan biosynthesis and degradation proteins [BR:
pska01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KAN5_28410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
LysM_OapA
GpP-like_1st
Motif
Other DBs
NCBI-ProteinID:
BDF96003
LinkDB
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Position
complement(3261718..3263001)
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AA seq
427 aa
AA seq
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MFSSQFIRILPLVIILTGCETTQEEPASQPKPEVKVKANPKTIFSEQNEDLAQIAPLSPQ
ELDDVWQRIRAQLTFANSSHPEVQQRIAWYLSHPNYMDEISRRAEPYLYYIVTEVEKRDL
PIELALMPLIESDFDASAYSHKHASGLWQLTPSIAKYFKVKISPWYDGRQDVIDSTRAAL
DFMEYLYKRFDGDWYHAIAAYNLGEGRVLRAISNNKKQGKPTDFFSLKLPKQTSQYVPKL
LAAAQLLKSQKMTFPAIANKDAIATVTISGSVILDNKSQWQLLEPLNYGVIRFPAIIDAP
HLVVPASEKIQFETMIANQKSNDYSQWQQYTVKRGDSLSVIAKRYKVSVNQLKAFNNLKS
STIRIGQKLVLPQLADTQIEHKVKSGESLWKIANHYKVSITKLKQWNSLSGDRLKVGDKL
TVFLSNS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcaagtcaatttatccgcattctgcctttagttattattttaaccggttgtgaa
actacacaagaagaaccagcctcacaacctaaacctgaagtgaaagttaaggcaaaccct
aaaacgatctttagtgaacaaaacgaagatcttgcacaaatagcccccttgagccctcag
gagcttgatgatgtttggcaacgtatccgagcccagctaacatttgccaattctagtcac
ccagaagtgcagcagcgcattgcttggtatttatcccacccaaattacatggatgaaata
agtcgccgtgctgagccttacctttactacatagtcactgaagttgaaaagcgggatcta
ccgatagaattagcactaatgccactgattgaaagtgactttgatgccagtgcctattcg
cacaaacatgcatctgggctttggcaactaaccccttctatagctaaatattttaaggta
aaaattagcccttggtacgatggtcgccaagatgtgatcgacagcactcgtgcagcgctt
gattttatggagtacttatataaacgctttgatggtgattggtatcatgctattgcagcc
tataatttaggtgaaggacgtgtacttagagcaatcagtaacaataaaaaacaaggtaaa
ccaacagatttttttagcttaaaactaccgaaacaaaccagtcaatatgtaccaaagtta
cttgctgcggcgcagttattaaaaagtcaaaagatgacgttccctgccatagcaaataaa
gatgcaatcgccacagtgaccatttctggttcagtcattttagataataaaagtcaatgg
caactgttagagcctttaaactacggggttattcgcttcccagcaattattgatgcgccg
catctcgtcgttcctgccagtgagaaaatacaatttgagaccatgatcgcaaaccaaaaa
agcaacgattacagccaatggcaacagtacaccgttaaacgtggtgatagcttaagtgtg
atagctaagcgctacaaagtgagcgtgaaccaactaaaagcattcaacaatttaaaaagt
agtaccatacgtattggccaaaagttggtactgccgcagttagccgatacacaaatagag
cacaaggtaaaatctggcgaaagcttatggaaaatagccaaccattataaagtcagcatc
actaaactaaaacaatggaacagcctttcaggcgaccgtttaaaagtaggtgataagctc
acagtgtttttatctaatagttaa
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