Pseudoalteromonas sp. KAN5: KAN5_30100
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Entry
KAN5_30100 CDS
T10721
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska00300
Lysine biosynthesis
pska00470
D-Amino acid metabolism
pska01100
Metabolic pathways
pska01110
Biosynthesis of secondary metabolites
pska01120
Microbial metabolism in diverse environments
pska01230
Biosynthesis of amino acids
Module
pska_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KAN5_30100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KAN5_30100 (dapF)
Enzymes [BR:
pska01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KAN5_30100 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BDF96172
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Position
complement(3450544..3451374)
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AA seq
276 aa
AA seq
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MLVNFSKMHGLGNDFVVIDNITQNVFLSRDQIRKLADRHFGIGFDQLLMVEAPYSPDLDF
HYRIFNADGNEVEQCGNGARCFARFVRMKGLTNKHKVTVSTKSGNLTLYIEKDGQVTVNM
GHPNFEPSKIPLKATKRELTYIIRAEEHTVFSGAVSMGNPHCVLEVDDIDTADVNTLGPL
LENHERFPQRVNVGFMQVINPEHIKLRVWERGVSETLACGTGACAAMVIGQIQSKLSTTV
QVDLPGGSLQIRWQGEGHPVRMTGPAEHVFDGQVAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaatttttccaaaatgcacggcctaggcaacgattttgttgtaattgataac
attacacaaaacgttttcctgtcacgagatcaaataagaaaactggcagatcgccatttc
ggcatcggctttgaccaattacttatggtagaagcgccttattctcctgatcttgatttc
cattatcgtattttcaatgccgatggtaacgaagtcgaacaatgtggcaatggcgctcgc
tgctttgctcgttttgtacgaatgaaaggccttaccaacaagcataaggttaccgtatcg
accaaatcaggtaacttgactttatatattgaaaaagatggtcaagtaacagtcaatatg
ggtcatcctaatttcgagccaagtaaaataccgctcaaagcgactaagcgtgaactcact
tatattatccgcgctgaagaacacaccgtatttagcggtgctgtatcaatgggtaaccca
cattgcgtactagaggtggatgacatagataccgccgacgtaaacaccctagggccatta
cttgaaaatcacgaacgttttccgcagcgagttaacgttggctttatgcaggtgatcaac
ccagagcacattaaactgcgagtttgggagcgcggcgttagcgaaactctggcttgcggt
accggtgcttgtgccgctatggtgattggccaaattcaaagtaaactctctaccacagtg
caggtcgatttacctggcggtagtttgcaaattcgctggcaaggtgaaggtcacccggta
agaatgacaggccctgctgaacatgtatttgatggacaagttgctttatga
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