Pseudoalteromonas sp. KAN5: KAN5_30380
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Entry
KAN5_30380 CDS
T10721
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pska Pseudoalteromonas sp. KAN5
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pska03009
]
KAN5_30380 (dbpA)
Enzymes [BR:
pska01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KAN5_30380 (dbpA)
Ribosome biogenesis [BR:
pska03009
]
Prokaryotic type
rRNA helicases
KAN5_30380 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
P-loop_SecA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDF96200
LinkDB
All DBs
Position
3481524..3483005
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AA seq
493 aa
AA seq
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MQMHNSAIINTLSAGALSLVNLIKFFVLELIVTATAFSSLALPTGLVDNLSTLGYTQMTA
VQAQSLPPVLEGKDIIAQAKTGSGKTAAFSLGVLAKLNVKRFRIQSLVLCPTRELAEQVA
VEMRKLARGIHNIKILTLCGGVSIGPQIGSLEHGAHIIVGTPGRVDDHIRKGTLRLDDVE
TLVLDEADQMLDMGFQDTLDAIIDCIPKQRQTLLFSATFPRAIEAIAKRVLSNPVMVKVE
EEQEKSTIKQYFYKMDNNKQRFNTLKLLLLKFQPESCVVFCNTKVETQQVCDDLSAEGFS
AVALHGDLEQRDRERTLIHFANKSASILVATDVAARGLDIDDMDMVINYHLAHDPQTHVH
RIGRTGRAGKKGIACSIYGDAEQFKVAQIGDHYECDFLPEQLPPFSLLEKPPYKPQMVTL
MIDAGKKQKVRAGDILGALTGKDGVAGRQVGKINVLDNVAFVAVERNSSKPALRKLTEGN
IKGRKIRARRLTR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatgcacaactctgctatcattaacacactttcagcaggggccttatcccttgtt
aatttaatcaaattttttgttttggaattaattgtgactgcaactgctttttcatctctc
gctttaccaactgggttggtagataacttatcaacgttaggttatacccaaatgacggcc
gttcaggcacaaagtttgccgcctgtgttggaaggtaaagacattatcgcacaagccaaa
acaggctcaggtaaaaccgctgcgtttagtctgggtgtacttgctaagctcaatgtgaaa
cgttttcgtattcaatcgttagtactttgcccaacccgagagcttgctgaacaagttgcc
gtggaaatgcgaaaattagcgcgtggtattcacaatattaaaattttaactttatgtggt
ggtgtatcaatagggccgcaaattggttctttggaacatggcgcgcacattattgttggt
acaccagggcgtgttgatgatcatattcgtaaaggcaccttacgtttagatgatgttgaa
accttagtgcttgatgaagctgaccaaatgcttgatatgggcttccaagataccttagat
gctattattgattgcattcctaagcagcggcaaacattattatttagcgcgactttccca
cgagcaatcgaagcgattgctaaacgagtgttaagtaaccctgttatggtgaaagtagaa
gaagagcaagaaaaaagcaccattaagcaatacttctataaaatggataataacaaacag
cgttttaatactttaaaactactgttacttaaattccaacctgaaagctgtgtagtgttt
tgtaataccaaagttgaaacacagcaggtgtgtgatgatttatccgctgaaggatttagc
gcagttgccttacatggcgatttagaacaacgtgatcgtgaacgcacacttatccacttt
gccaataaaagtgcctctattttagtggccaccgatgtagccgctcgtggtttagatatt
gacgacatggacatggtaattaattaccaccttgctcatgatccacaaactcacgtacac
cgtattggtcgtactggtcgtgctggtaaaaaaggtattgcgtgttcaatttatggtgac
gcagaacaatttaaagtggcgcaaattggcgatcactacgaatgtgattttttgcctgag
caactgcctccatttagcttacttgaaaagccaccatataaaccgcaaatggtcaccttg
atgattgatgcgggtaaaaaacaaaaagtacgggctggtgatattttaggtgcgctaacg
ggtaaagatggcgttgcagggcgtcaggttggtaaaattaacgtacttgataacgtggct
tttgttgctgttgaacgtaactcttcaaaaccagcactacgtaaattaacagaaggtaat
attaaaggccgtaaaattcgtgctcgccgcctaactcgttaa
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