Pseudoalteromonas sp. KAN5: KAN5_30430
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Entry
KAN5_30430 CDS
T10721
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska03018
RNA degradation
Brite
Enzymes [BR:
pska01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAN5_30430 (rhlB)
Messenger RNA biogenesis [BR:
pska03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KAN5_30430 (rhlB)
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GFIT
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NCBI-ProteinID:
BDF96205
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Position
3488434..3489711
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AA seq
425 aa
AA seq
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MTKTHLTDKKFSDFAIAPEVVAGLTESGFEYCTPIQAKCLPFICDGRDIAGQAQTGTGKT
LAFLTATCHRLLQSSKAPSKHPRALIMAPTRELAIQIHKDAKILAPHCNLNLGLVYGGED
YEKQRAQLEKGVDILIGTTGRLIDLYKQGCYTLNEIEVVVLDEADRMFDLGFIKDIRYMF
RRMPDTSQRLNLLFSATLSYRVQELAFEHMTNPEHVQIEPDVKTGKRIEEELFHPSQEDK
VKLLLTLIEEEWPEKAIVFANTKHSCETVYAWLKADGHRVGMLTGDVNQKKRQSILAQFS
KGDLDFLVATDVAARGLHIPEVSHVFNFDLPDDCEDYVHRIGRTGRAGASGKAISFACEQ
YAYNLHEIEEYIEHSIPLSHYDKSALLDDVTKPTIQRKRNYSTGPRSRSNNNGRRPNNSY
QKARS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacacatttgaccgataaaaagttttcagactttgctattgcaccggaagtg
gttgccgggttaaccgaaagtgggtttgaatattgcacacccatacaagctaaatgccta
ccttttatttgtgatggccgcgatattgcgggtcaagcacaaacgggtacaggcaaaacg
ttggcgtttttaaccgccacgtgccatcggttattacaatctagcaaagcacctagtaaa
catccaagagccctgatcatggcccctactcgggagcttgcgattcagatccacaaagat
gcaaaaattttagcgccacactgtaatcttaacttaggtttagtatatggtggcgaagat
tacgaaaaacaacgtgcacagttagaaaaaggcgttgatattttaattggcaccacaggt
cgcttaatcgatttatataaacaagggtgttataccctcaatgaaatcgaagtagtggtc
cttgatgaagccgatcgtatgtttgatttgggttttattaaagatattcgttatatgttt
cgtcgtatgccggatacatcgcaacgacttaacttattattctccgccacattatcgtat
cgggtacaagagttggcgtttgagcacatgacaaatccagagcatgtgcaaattgagcca
gatgtaaaaactggcaaacgtattgaagaagaactatttcatccttcacaagaagataag
gttaagctgttattaaccttgattgaagaagaatggcctgaaaaagcgattgtgtttgca
aatactaagcatagctgcgaaacagtgtatgcctggttaaaagcggatggtcatcgtgtt
ggtatgcttactggcgacgttaaccagaaaaagcgtcaatcaattttagcgcaattcagc
aaaggtgatttagacttcttggtagcaacggatgtagcagcacgtggcttgcatatccct
gaagtaagtcatgtatttaacttcgacttaccagatgattgtgaagattacgttcatcga
atcggtcgtacaggtcgtgcaggcgcatctggtaaagcaattagttttgcatgtgagcag
tatgcatataaccttcatgaaattgaagaatacatagagcacagcatacctttatcgcat
tatgataaaagtgcattgcttgatgatgtaactaagcctactattcaaagaaaacgtaat
tattcaacaggcccgcgtagccgtagtaacaacaacggacgtagacccaataatagttac
caaaaagcacggtcgtag
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