Pseudoalteromonas sp. KAN5: KAN5_30480
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Entry
KAN5_30480 CDS
T10721
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska03420
Nucleotide excision repair
pska03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KAN5_30480
03430 Mismatch repair
KAN5_30480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pska03400
]
KAN5_30480
Enzymes [BR:
pska01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KAN5_30480
DNA repair and recombination proteins [BR:
pska03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KAN5_30480
MMR (mismatch excision repair)
Other MMR factors
KAN5_30480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
AAA_22
SAP18
Motif
Other DBs
NCBI-ProteinID:
BDF96210
LinkDB
All DBs
Position
complement(3501799..3503964)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSELLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRTRVEQALQAPVGGMWIGTFHGLSHRILRAHHREANLPEAFQILDSDDQL
RMIKRLLKAMNIDDKKWPAKQFGWYISAKKDEGLRPKDIQAYDINEQMMLKVYTAYQEAC
DRAGLVDFAEILLRSFEVLKNNPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGDTN
SIMIVGDDDQSIYGWRGAKIENIKRFLTDFEAETIRLEQNYRSTATILKASNALIQNNSE
RMGKSLWTDGNDGEPISVYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRSNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALAYLRLVGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAIIEQQHLSGRAASVVTKFVELVEHIEDKISDLTLEEQAK
YAIQTSGLMAMYQAEKGEKGRARVENLEELISACGQYELPEDEEFSSPLQGFLAYTSLES
GDGQAEEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMEKLYISHAESRRLYGQEKYHSPSRFLREMPEDCIEEIRIKTQVSRPPAAGRFSSS
VSHAVFEESGFNLGQRVLHAKFGVGTVINYEGSGAQSRVQVNFDDFGSKWLVTVYARLQA
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcagaattactcgacggtttaaatgataaacaacgggatgccgtagctgct
ccactgcaaaatatgttggtgttggcaggcgcaggctcaggaaaaactcgagtactggtt
catcgtatcgcttggcttatgcaagtagagcaagcctctgcttacagtatttttgcagta
acctttaccaataaagccgccaaagaaatgcgcacgcgtgtagagcaagcccttcaagcg
cccgtaggtggtatgtggatcggtactttccatggtttatcacaccgtattttacgcgcc
catcaccgtgaagctaatctgcctgaagcatttcaaattttagattcagacgatcagcta
cgaatgatcaaacgcttattaaaagccatgaatatcgatgataaaaaatggcccgcaaag
caattcggttggtatatcagcgcaaagaaagacgaaggcctacgtccaaaagacattcaa
gcctatgatattaacgagcaaatgatgctcaaagtttatactgcttatcaagaagcgtgt
gaccgtgcaggcttagttgactttgccgaaattctgctacgtagttttgaagtactaaaa
aacaacccaaccttgttgcgccattatcagcaacgctttgcgcacatgcttgtagacgag
ttccaagataccaataccattcaatatgcctggctaaaattactcgctggcgacaccaat
agcattatgattgttggtgatgatgatcaaagtatttatggttggcgtggtgcaaaaatt
gaaaacattaaacgctttttaactgactttgaagccgaaacaattcgtcttgagcaaaac
taccgttcaacagctaccattctaaaagcatccaatgcgcttattcaaaacaattccgag
cgcatgggtaaaagcctctggaccgatggtaatgatggcgagccaatctcagtgtatgcc
gcctttaatgaactcgacgaagcacgctttgttagtagcaaattacgtagctggctcaat
gccggcaatgcactgcaagatgccgcaatcttataccgtagtaatgcgcagtcgcgggta
cttgaagaagctatgttacaagaaggcttaaagtaccgtatttacggcggtatgcgcttc
ttcgaacgtcaagaaatcaaagacgcccttgcttatttgcgccttgtagggaaccgccaa
gatgacgcagcctttgaacgggttattaataccccagcgcgcggtattggtgataaaaca
ctcagccatatacgtgattgcgctcgcgctgaatcattgccactttggtatgcggctaaa
gccattattgaacaacagcacttatcagggcgtgccgccagtgttgttactaagtttgtt
gagttggttgaacatattgaagataaaattagcgatctcacattagaagagcaagccaaa
tacgcaattcaaacatccggcttaatggcgatgtaccaagctgaaaaaggcgaaaaaggc
cgtgcgcgagtagaaaacttagaagagcttattagcgcgtgtggtcagtacgaactacct
gaagatgaagagtttagttcaccactacaaggatttttagcgtatacctcgcttgaatcc
ggtgatggtcaagcagaagaacatgaagatgcagtgcaaatgatgacattgcactcagcg
aagggcttagagtttccgctggtatttatggtcggtgttgaagaaggcatgttcccttct
cagcaaagtaatgaagaatctggtcgcttagaagaagaacgtcgcctgtgttatgtcggc
atgactcgcgcaatggaaaaactctacataagtcacgctgaaagtcgccgcctctatggg
caagaaaaataccacagtccatcacgttttttacgtgagatgccggaagattgtattgaa
gaaattcgtatcaaaacccaagtatctcgcccgccagcagcaggacgcttcagttcatca
gtaagccatgctgtttttgaagaaagcggctttaatttagggcaacgcgtgttacatgct
aagtttggtgtgggtactgtgatcaattatgaaggcagtggcgcgcaatcacgcgtacaa
gttaactttgatgactttggtagcaaatggttagtaacagtgtatgcacgactgcaagct
atttag
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