Pseudomonas sp. KU43P: KU43P_00810
Help
Entry
KU43P_00810 CDS
T10397
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03030
DNA replication
pskp03410
Base excision repair
pskp03420
Nucleotide excision repair
pskp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KU43P_00810
03410 Base excision repair
KU43P_00810
03420 Nucleotide excision repair
KU43P_00810
03440 Homologous recombination
KU43P_00810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pskp03032
]
KU43P_00810
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_00810
Enzymes [BR:
pskp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KU43P_00810
DNA replication proteins [BR:
pskp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KU43P_00810
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KU43P_00810
NER (nucleotide excision repair)
GGR (global genome repair) factors
KU43P_00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
BBH43604
LinkDB
All DBs
Position
76352..79099
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVKALGYPLLCVEGVEADDVIGTLAR
SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVPLDVEVDALLCGEPDREALLALYTEMEFKSWIADIQREAAKAGDDI
AQVEEPAAKVEPKYETILDQARFDAWVEKLRQAPLFAFDTETTSLDAQQAQLVGLSFAVQ
AHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANGTPAIE
MRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQIDLDKA
GPYAAEDADITLRLHQALQVRLAKTPSVQPVLMDIEMPLVPVLAKIERQGALVDAALLQV
QSGELGVKMAELEQRAYALAGEEFNLGSPKQLGSILYDKLGMPVLSKTAKGQPSTAEAVL
DELAEQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPIRTAEGRRIRQAFVASPGYTLLAADYSQIELRIMAHLAKDEGLLHAFRNNLDV
HRATAAEVFGVALEAVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIIKRAMVNVDNWLSQSGLDARVILQVHDELVLEVREDLVDQVKDEIRGHMSSAAQLDVP
LLVEVGIGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcctcctacctctaccgcgctttccac
gcactgccgccgctgaccacttccaagggcatgcccaccggcgcggtcaagggtgtgctg
aacatgctcaagagcctgcgcaaacagtacccggacagcccgtttgccgtggtgttcgac
gccaagggtggcaccttccgcgatgccatgttcgctgaatacaaggccaaccgcccgagc
atgccagacgacttgcgcgttcaggtcgagccgctgcacgccagcgtcaaggcactgggt
tacccgctgctgtgcgtcgaaggtgtggaggctgacgacgtgatcggtaccctggcgcgc
agcagcgcggccctgggccggccggtgatcatctcgaccggtgacaaggacatggcgcag
ttggtggacggccacattaccctggtcaacaccatgaccggcagcgtgctggacgtggcc
ggcgtgcacgagaagttcggtgtcggcccggagcacatcatcgatttcctcgccctgatg
ggcgacaaggtcgacaacatacccggtgtacctggcgttggcgagaagacggccgttggc
ctgttgactggtatcggcggtggtctcagcgacctgtacgccaacctggacaaggtaccg
gccctggccatccgtggcgccaagaccctgcccgccaagttggaagagcaccgcgacgcg
gcgttcctgtcctatgagctggcgaccatcaaggtcgatgtgccgctggatgtcgaagtg
gacgcgctgctgtgcggcgagccggaccgcgaagccctgctggcgttgtacaccgagatg
gaattcaagagctggatcgctgacatccagcgcgaagcggccaaggccggcgatgacatc
gctcaggtcgaggagcctgcggccaaggtagagccgaagtacgagaccatccttgaccag
gcccgcttcgacgcttgggtcgaaaaactgcgccaggcgccgctgttcgcgttcgatacc
gaaaccaccagcctcgatgcgcaacaggcccaactggtcggcctgtcgttcgcggtccaa
gcgcatgaagcagcctacgttccgctggcccatgactatgaaggcgcacctgttcaactg
gaccgcgaggccgtattgctggccctgaagccattgctggaagacccggccaaggccaag
gtcgggcagaacgccaagtacgacatcaacatcctggccaatggcacgccggccatcgag
atgcgtggcgtcgcctacgacacgatgctcgaatcctacgtgctcaattccaccgccacc
cgccacgacatggacagcctggcgcagaagtacctcgaccacaccaccattgccttcgag
gatatcgctggcaagggcgccaagcagctcaccttcaaccagatcgacctggataaggcc
ggcccctatgccgccgaggacgccgacatcaccctgcgcctgcaccaggccctgcaagtg
cgcctggccaagaccccgagcgtgcagccggtactgatggacatcgagatgccgctggtg
ccggtactggccaagatcgagcgccagggtgcgctggtcgatgccgcactgctgcaagtg
cagagcggtgagctgggggtgaagatggcggagctggaacagcgcgcttatgccctggcc
ggtgaggaattcaacctgggttcgcccaagcagttgggctcgatcctctacgacaagctg
ggcatgccggtattgagcaagactgccaagggccagccatccactgccgaagccgtgctc
gacgagctggccgaacaaggctacccgctgcctgaggtactgatgcagtaccgcagcctg
agcaagctcaagagcacctacaccgacaagctgccggggcagatcaacccgcgtaccggg
cgtatccacacctcgtaccagcaggcggtggccgccaccgggcgcctgtcgtcgagcgac
ccgaacttgcagaacattccgatccgtaccgccgaaggccgacgcatccgccaggccttc
gttgccagcccgggctacacgttgctggcggcggactattcgcagatcgagctgcgcatc
atggcgcacctggccaaggatgaaggcctgctgcatgccttccgcaataacctggatgtg
caccgcgccactgctgccgaagtcttcggcgtcgccctggaggcggtcaccaccgaccag
cgtcgcagtgccaaggccatcaacttcgggctgatctacggcatgagcgccttcggcctg
gccaagcagataggcgtcgaccgcaagcagtcccaggattacatcgaccgctacttcgca
cgctacccgggtgtactggcctacatggagcgcacccgcgcccaggctgccgaacaagga
ttcgtcgaaaccctgttcggccgtcgcctgtacctgccagacatcaacgccaagaaccct
gcgctgcgcaaaggtgccgagcgtacggcgatcaacgcgccgatgcaggggaccgcggcc
gacatcatcaagcgggccatggtcaacgtcgacaactggctcagccagagcggcctggat
gcgcgtgtcatcctccaggtgcacgatgaactcgtgctagaggtgcgtgaagatctggtc
gatcaggtgaaagatgaaattcgcgggcacatgagcagcgccgcgcaactggatgtgccg
ctgctggtcgaagtaggtattggcgcaaattgggacgaagctcactga
DBGET
integrated database retrieval system
