Pseudomonas sp. KU43P: KU43P_04560
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Entry
KU43P_04560 CDS
T10397
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pskp Pseudomonas sp. KU43P
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pskp03009
]
KU43P_04560
Enzymes [BR:
pskp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KU43P_04560
Ribosome biogenesis [BR:
pskp03009
]
Prokaryotic type
rRNA helicases
KU43P_04560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
SBP_bac_3
TraP
Motif
Other DBs
NCBI-ProteinID:
BBH43979
UniProt:
A0A5K7TQP5
LinkDB
All DBs
Position
complement(506831..508216)
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AA seq
461 aa
AA seq
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MTTESTAFATLPLSAAMLANLDALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIAAIIGKTPSR
RQTLLFSATYPAGIEQLAADFMRKPQQVKVESLHADNQIEQRFIEIDAQHRLEAVTRVLG
HYRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVA
TDVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGIAVSLVAPAEGHRAQAIE
ALQKSPLRWDQLDSLKSKGGEPLLPVMTTLCIAAGRKDKLRPGDILGALTGDAGIPGKQV
GKIAIFDFQAFVAVERALAKQAMQRLNSGKIKGRALKVRII
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgaatccaccgcctttgctaccttgccgctgtccgccgccatgctggccaac
ctggacgccctcggctatgcctcgatgacgcccatccaggcccagagcctgcccgtcatc
ctcaagggccaggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggttgccaggcgctggtgctg
tgcccgacccgcgagctcgccgaccaggtggccaaggagctgcgccgcctggcccgcgcc
gaggacaacatcaagatcctcaccctctgtggtggtgtctcgctgggcccgcagatcgcc
tcgctggaacacggtgcgcacatcatcgtcggcaccccaggccgcatccagcagcacctg
gacaaaggcaccttggtgctcgacgggctcaacacgctggtgctcgacgaagccgaccgc
atgctcgacatgggtttcttcgacgccatcgccgccatcatcggcaagaccccgtcgcgt
cgccagaccctgctgttctcggccacctatccggccggtatcgagcagctggctgccgac
ttcatgcgcaagccgcagcaagtgaaggtcgagagcctgcacgccgacaaccagatcgag
cagcgtttcatcgagatcgatgcgcaacaccgcctggaggccgtgacccgcgtgctcggc
cactaccgcccgcagtcgtgcgtggcgttctgcttcaccaagcagcagtgcgaggacgtg
gtggcccacctgaccgccaaaggcatcgtcgcccaggccctgcatggcgacctggagcag
cgcgaccgcgaccaggtgctgaccatgttcgccaaccgcagcagctcggtgctggtggcc
accgacgtggccgcccgcggcctggacatcgatggcctggacatggtcatcaacgtggag
ctggcgcgtgatgcggagatccacgtgcaccgcgtcggccgtaccggtcgcgctggcgag
aagggtatcgccgtcagcctggtggcgccggctgaaggccatcgcgcccaggccatcgaa
gcgctgcagaagagcccgctgcgctgggaccagttggacagcctgaagagcaagggtggc
gagccgttgttgccagtgatgaccaccctttgcattgccgcagggcgcaaggacaagctg
cgtccgggtgacatcctgggtgcgctgaccggtgatgccggcattcctggcaagcaggtg
ggcaagattgccattttcgacttccaggcgtttgttgcggtagagcgggcattggccaaa
caggccatgcagcggctgaacagcggcaagatcaagggccgtgccctgaaagtccgcatt
atctga
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