Pseudomonas sp. KU43P: KU43P_10070
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Entry
KU43P_10070 CDS
T10397
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pskp Pseudomonas sp. KU43P
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pskp03009
]
KU43P_10070 (rlmF)
Enzymes [BR:
pskp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
KU43P_10070 (rlmF)
Ribosome biogenesis [BR:
pskp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KU43P_10070 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BBH44530
LinkDB
All DBs
Position
complement(1122603..1123553)
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AA seq
316 aa
AA seq
DB search
MTQKPTLHPRNRHQGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLK
AQYGIQHWDIPADYLCPPIPGRADYIHVVADLLAEDNAGEVPKGAQVRALDVGVGANCIY
PLLGHSDYRWRFLGSDIDPVALASAKAIVQANGLVKGIALRQQGNRKHILGGLLQADERF
DLTLCNPPFHASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQ
LVGESVQCAEQVLWFTTLVSKASNLPGIEAALDKAGVKARRIVEMGQGQKQSRMVAWSFH
DEAARQAWHARRKTQA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaaacccacccttcacccgcgcaaccgccaccagggccgctacgacttcccc
agcctgatcaaggcccacccggacctggctcgcttcaccatcaccaacccccatggcaag
cccagcatcgacttcgccaaccccgaagccgtgcgggtgttcaaccgcgccttgctcaag
gcccagtacggcatccagcactgggacatccccgccgactacctgtgcccacccatacct
ggtcgcgccgactacatccacgtggtcgccgacctgttagccgaggacaatgccggtgag
gtgcccaagggtgcccaggtgcgcgccctggacgttggcgtgggcgccaactgcatctat
ccgctgctcggccacagcgactaccgctggcgctttctcggcagcgacatcgaccctgtg
gccctggcctcggccaaggccatcgtgcaggccaacggcctggtcaagggcattgccctg
cgccagcagggcaaccgcaagcacatccttggcggattgttgcaagccgatgaacgcttc
gacctgaccctgtgcaacccacccttccacgcctcacgtgatgaagccacccgtggcagc
cagcgcaagtggaagaacctgggcaagcaggaccccaagcgaaagctgccggtgctgaac
ttcggcgggcagaacaacgaattgtggtgcgagggcggcgagattcgtttcgtcacgcaa
ctggtcggcgaaagcgtgcagtgcgctgaacaggtgctgtggttcaccaccctggtgtcc
aaggccagcaacctgcctggtatcgaagcggccctggacaaggctggcgtcaaagcccgg
cgcatcgtcgaaatgggccaggggcagaagcagagccggatggtcgcctggagcttccat
gacgaagctgcacgccaagcctggcacgcccggcgcaaaacacaggcatga
DBGET
integrated database retrieval system
