Pseudomonas sp. KU43P: KU43P_10530
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Entry
KU43P_10530 CDS
T10397
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KU43P_10530 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_10530 (xseA)
Enzymes [BR:
pskp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KU43P_10530 (xseA)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KU43P_10530 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBH44576
LinkDB
All DBs
Position
complement(1179087..1180466)
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AA seq
459 aa
AA seq
DB search
MIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHLYFTLKDS
GAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
EALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPT
AVQGREAINQIVRALQQADRLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLQQRLDGLQRRLLLRMQNRLTHDRLR
LDSLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDTRLAAQHPGRTL
KLLGQRLDSLAERLPRAMRDVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDERGQAI
RSAEQTHNGQRLTARLNEGELQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaccccttcgaacgacttggcctggaccgcgaggtcctcaccgtcagccag
ctcaacggccgcgctcgcgtgctgctggaagacgtgttccgcagcgtctgggtggaaggc
gaaatctccaacctcgcccgcccggcctccggccacctgtacttcaccctcaaggacagt
ggcgcccaggtgcgctgcgcgctgttccggcagaacgcaacgcgggtgcgccaggccctg
cgcgacggcctggcggtgcgggtacgcggcaaggtttcgctgttcgaagggcggggcgac
taccagctgattctcgatacggtcgagccggccggtgacggcgcgctgcgcctggccttc
gaggcgctgaaagaaaaactcggcgccgaggggctgttcagtgccgaacgcaagaagccg
ctgccggcccacccacagcgcatcggcatcatcacctcgcccaccggcgcagtgatccgc
gacatcatcagcgtgttcggccgccgcgcgccccaggtcgagctgaacctgattcccacc
gccgttcagggccgcgaggcgatcaaccagatcgtccgtgccttgcagcaggccgaccgg
cttggcttcgatgccctgatcctggcccgtggcggcggttcgctggaagacctctggtgc
ttcaacgaagaagccgtggcgcgtgcggtggccgcctgcgtgacgccgatcgtcagcgcc
gtgggccatgaaaccgatgtatcgatcagcgacttcgtcgccgacgtacgcgcccccacg
ccgtctgccgccgccgagttgctggcccccgacaacagtggcttgcagcaacgcctggac
ggcctgcaacggcgcctgctgctgcgcatgcagaaccgcctgacccacgaccgcctgcgc
ctggactcgctgacccggcgcctgcgccaccccggcgagcgcctgcgccaacaggcccag
cgcctggatgacctggacatgcgcctgcgccgcgcgttcatgctcaacctcaaccagcgc
cgcgagcgcctggcacgcctggacacacgcctggccgcacagcatccgggccgcaccctg
aagctgctcgggcagcgcctggacagcctcgccgaacgcctgccacgggccatgcgcgac
gtgctcaaggaccgccgccagcgtttccaggcgcagttgcagacgctgcaggtggtcagc
ccgctggccaccctggcgcgtggctacagcatcctcctcgacgagcgggggcaagccatc
cgcagcgccgagcagacccacaacggccagcgcctgactgcccgcctgaacgaaggtgag
ctgcaggtgcgggtcgaggacaatcacctgaccccggtcaccctttccctactggactga
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