Pseudomonas sp. KU43P: KU43P_14540
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Entry
KU43P_14540 CDS
T10397
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KU43P_14540 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pskp03019
]
KU43P_14540 (recQ)
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_14540 (recQ)
Enzymes [BR:
pskp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KU43P_14540 (recQ)
Messenger RNA biogenesis [BR:
pskp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KU43P_14540 (recQ)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KU43P_14540 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
HTH_23
ResIII
GerE
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
BBH44977
UniProt:
A0A5K7TT51
LinkDB
All DBs
Position
1596475..1598619
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AA seq
714 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVASGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVAAAALNSTLSAEQQRDLAARLRRGEVKMLYLAPERLVQ
PRMLEFLRGLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCEQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRVEQHK
LDAMLALCEETRCRRQSLLAYFDEVLEQPCGHCDNCVDQIQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGNALAEAEWRSLFRQLVARGLVDIDLE
GYGGLRLADSCRPLLRGEVKLQLRRDLKPQTVAKASTSGGSPASQLVRVEERELWEALRT
LRRKLAEEHSVPPYVIFPDSTLLEMLRSQPTSLSDMAQVSGVGARKLERYGQAFLEVLNG
AGGTEEAPKVVLDLRHELVSLARAGMTPAQIAGQLKCSEKNVYSLLAEAIGRQELSLEQA
LDLPEDLMMEVQDAFLDGEGELPPVSAIAPLFGPRVPEGVLYCIRAALAAEFEL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggatatcttcggctacgacagtttccgtggg
cgccaggcagcgatcatcgaatgcgtggccagcggcggcgacgccctggtgctgatgcct
accggtggcggcaagtcgctgtgcttccaggtgccggggttgctgcgcccggggctgacg
gtagtggtgtcgccgctgatcgcgctgatggatgatcaggtcgccacgctggacgagctg
ggtgtcgccgccgcggcgctgaattccaccctgagcgcggagcagcaacgtgacctcgcc
gcgcgcctgcgccgtggcgaagtgaagatgctgtatctggcaccggagcgcctggtgcag
ccgcgcatgctggagttcctgcgcgggctggacattgccctgttcgccatcgacgaggcc
cactgcgtatcgcaatggggccacgacttccgccctgaatacctgcaactcggccagctg
gccgagctgttcccccatgtaccgcgcatcgccctgaccgccaccgccgacatgcgtacc
cgcgaagagatcgtccagcgcctgcatctgcaaggcgccgagcggttcctgtcgagcttc
gatcggccgaacatcttctaccgcatcgtgcccaaggaggcgccgcgcaagcagctgatg
gccttcctcggcgagcgccgtggcaatgccggcatcgtctattgcctgtcacgcaagaag
gtcgacgagaccgccgctttcctgtgcgagcaaggcttcccggcgctgccgtatcacgca
ggcctggccgccgaaacgcgtgccgccaaccaacaccgtttcctcaacgaggaagggttg
atcatggtcgccaccattgccttcggcatgggcatcgacaagcccaacgtgcgcttcgtc
gcccacctcgacctgcccaagtcgctggaagcctattaccaggagaccggccgcgccggc
cgtgacggcctgccgtcggacgcctggatggcctacggcctgcaggacatggtgatgctc
aagcagatgctgcagaactccgagggtgacgagcgccacaagcgggtcgagcagcacaag
ctcgatgccatgctggccttgtgcgaagagacgcgctgccgccgccagtcgctgctggcc
tacttcgacgaagtgctcgagcagccgtgcgggcattgtgacaactgcgtcgaccagatc
cagacctgggatgccaccgaacctgcgcgccaggccctgtcggcggtgttccgtactggc
cagcgctatggggtgggccatctggtcgacgtactgctgggcaaggacaccgaaaaggtg
cgcaacttcggccacgagaaactttcggtgttcggcgtcggcaacgcgctcgccgaggcc
gaatggcggtcgctgttccgtcagttggtggcgcgcggcctggtggacatcgacctggaa
gggtatggcggcctgcgcctggccgacagttgccggccgttgttgcgtggcgaggtgaag
ctgcaactgcgccgcgacctcaagccgcagacagtggccaaggcctctaccagcggcggc
agcccggccagccagctggtgcgtgtcgaggagcgcgaactgtgggaggccctgcgcacc
ctgcggcgcaagctcgccgaagaacacagcgtgccgccctacgtcattttccccgactcc
accttgctggaaatgttgcgcagccagccgaccagcctcagcgacatggcccaggtcagt
ggtgtgggcgcacgcaagctggagcgctacggccaggcctttctcgaagtcctcaatggc
gcgggtggcaccgaggaggcgccgaaagtggtactcgacctgcgccatgagctggtcagc
ctggcccgcgccggcatgaccccggcgcagatcgccgggcagctcaaatgcagcgaaaag
aacgtctacagcctgctggccgaagccatcggccgccaggagctaagcctggagcaggcg
ctggacctgccggaagacctgatgatggaggtgcaggacgcgtttctcgacggtgaagga
gaattgccgccggtatcggccatcgcacccttgttcggcccacgggttccagaaggggtg
ctgtactgcattcgtgcggcactggcggcggagttcgagctgtaa
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