Pseudomonas sp. KU43P: KU43P_37160
Help
Entry
KU43P_37160 CDS
T10397
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp00071
Fatty acid degradation
pskp00280
Valine, leucine and isoleucine degradation
pskp00310
Lysine degradation
pskp00362
Benzoate degradation
pskp00380
Tryptophan metabolism
pskp00410
beta-Alanine metabolism
pskp00640
Propanoate metabolism
pskp00650
Butanoate metabolism
pskp00907
Pinene, camphor and geraniol degradation
pskp00930
Caprolactam degradation
pskp01100
Metabolic pathways
pskp01110
Biosynthesis of secondary metabolites
pskp01120
Microbial metabolism in diverse environments
pskp01200
Carbon metabolism
pskp01212
Fatty acid metabolism
Module
pskp_M00087
beta-Oxidation
pskp_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KU43P_37160 (fadB)
00650 Butanoate metabolism
KU43P_37160 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KU43P_37160 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KU43P_37160 (fadB)
00310 Lysine degradation
KU43P_37160 (fadB)
00380 Tryptophan metabolism
KU43P_37160 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KU43P_37160 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KU43P_37160 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KU43P_37160 (fadB)
00930 Caprolactam degradation
KU43P_37160 (fadB)
Enzymes [BR:
pskp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KU43P_37160 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KU43P_37160 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KU43P_37160 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KU43P_37160 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
BBH47239
LinkDB
All DBs
Position
complement(4110425..4112572)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLDELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSSTAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENPKVKQAVLSEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPVIFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaatcgcctgaccctggacgagctg
cgccaggccgtcgacgccatcaaggccgacgcctcggtgaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgataacttcaagctg
cccgaggccgagctggtggccggcaacctggaagccaaccgcatcttcaatgccttcgaa
gacctcgaagtgccgaccgtggcggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggccgactaccgcgtcatgtccagcaccgccaagatcggcttgccggaa
gtcaagctggggatctacccaggcttcggtggtaccgtgcgcctgccgcgcctgatcggt
tcggacaacgccatcgaatggatcgccgccggcaaggaaaaccgtgccgaagacgccctc
aaggtcggtgccgtcgacgctgtggttgcccccgagctgctgcaggccggtgccctcgat
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagcccaagctg
gaaaagctcaagctcaatgccatcgagcagatgatggctttcgagactgccaaaggcttt
gttgcgggccaggccggcccgaactaccccgcgccggtcgaagccatcaagtccatccag
aaagctgccaacttcggccgtgacaaggcgctggaagtggaagccgcaggctttgccaag
ctggccaagacttcggtcgccgagagcctgatcggcctgttcctgaacgaccaggaactc
aagcgcaaggccaaggctcacgacgagatcgcccacgacgtgaaacaggccgccgtgctc
ggcgccggtatcatgggtggcggtattgcctaccagtcggctgtcaaaggcacgccgatc
ctgatgaaggacatccgtgaggaggccatccagctgggcctgaacgaggcgtccaagctg
ctcggcaagcgcgtcgagaaaggccgcctgaccccggcgaaaatggccgaggcgctcaac
gccattcgcccgaccctgtcctatggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaggccgtgctgtcggaagtggaaggccaggtgaaa
gaggacgcgatcctcgcttccaacacctcgaccatttccatcaacctgctggccaaggcg
cttaaacgccctgaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgcct
ctggtcgaagtcattcgtggcgagaagtccagtgatgtggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgtgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggcgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccgatgggccctgcctacctg
atggacgtggtcggcatcgacaccggccaccatggccgtgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgatcgccgctccgccgtcgacgccctgtacgaagccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgtggcaaaccg
aagaaagtcttcgatgccaccgtgctcgacgtgctcaagccggtcatcttcgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtgccactgtgcctggagaccgta
cgctgcctggaagacggtatcgtcgaaacggctgcagaagcggacatgggcctggtctat
ggcattggcttccctcccttccgcggtggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggccgatcagtacgccgacctggggccgctgtaccacccgacc
gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
DBGET
integrated database retrieval system
