Pseudomonas sp. KU43P: KU43P_37910
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Entry
KU43P_37910 CDS
T10397
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pskp Pseudomonas sp. KU43P
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_37910 (sbcC)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KU43P_37910 (sbcC)
Archaeal homologous recombinant proteins
KU43P_37910 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
AAA_15
cobW
AAA_22
AAA_18
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BBH47314
LinkDB
All DBs
Position
4205255..4208899
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AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIGREAKVPDADGDIPTSDPRNLLRRGSGNGYAEVDFVGIDGHRYRARWEANRARDKA
NGKLQNSRQSFYDLDSEQLLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DRERSELLEKLTNTAIYTRLGQRAFSKARETGEAHTALKDRASHLLPMAAEARTELDQRL
EQALAQFKADQANERQLEQQRNWLNEQRQLHAQHAEASQALAAAEQRWQDLAEQRLDLQR
LERLAPQRHQFHRQQMLNAQLAPLAATLTDQQRQQGELLTRTSELELALQTARQALAHHQ
TQHSEQAPRVRQAYAAQDSLARLEQEQVAQRSASEHADLQVAEGQQQLQQLEDHQQRSLQ
QLAQVDTALADSQHLESLANAWQAYLPQLKQVMLTGGRLAKGREELPGLQAQVSQANAKL
QAERDAFDLLFQEAGAEPQALAEQIDLLGGMLQDNRKQQRAVEELSRLHGRELELRQQLD
TLRERQQQAMQQRQQLIGAGTAAKAELEAAEQALTLTRQLLARQRLARNTSVEELRAQLH
DGEPCPVCGSAEHPFHQPDALLQSLGRHDQAEEDAAQKQVETLNNKLVELRTQLGVVNAQ
LKDYQQQHAQLGEQLQPVQAQVQAHSLWPALAPQDDQARSTWLDSQLRRLNDEINQDEKR
QGALLTLQKESARLNQQLQAAQQAQQQAQHQLDHQHQALATDEQQLQQGLSDLASVLPQD
VLKALSDDPAHAFLALDQQIAQRLQHLEQRKDEQQEQQARQVQLDKLRDQQQARLQTQQQ
LQHKLAALDEQRQQAQASLEALLGQHASADAWQQHLDAQLEQARTVDADTAQRLQDLRTQ
GVQLASELKANTQQQQALESECQQLQGDIAQWRAAHPELDDAGLDRLLAMDDAQLNDLRQ
RLQGAERAIEQGRVLLQERDQRLLQHAALMTVESSAEALEQALGELRERLAGHEQQCAEL
RAQQADDQRRQQAHQALAGEIEQAYQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatccctggccggcccggtcgatatc
gacttcaccgcagagcccctggccagcgcgggcctgttcgccatcaccgggcccaccggg
gccggcaagagcaccttgctcgacgccctgtgcctggcgctgttcggcaccgtgccacgg
ctcaatgacatcggccgtgaagccaaagtgcccgacgccgacggcgacatccccacctcc
gacccgcgcaacctgctgcgccgtggctccggcaatggctatgccgaagtcgatttcgtc
ggcatcgacggccaccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggcc
aacggcaaactgcagaacagccgccagagcttctacgacctggacagcgaacagctgctg
ggcagtggcaagaacgaatacaagcaactggtcgaagcccggctgggccttaacttcgag
cagttcacccgcgcggtgatgctggcccagagcgagttcggcgccttcctcaaggccgac
gaccgcgagcgcagcgagctgctggagaagctcaccaacaccgccatctacacccgcctc
ggccagcgagccttcagcaaggcgcgggaaaccggcgaagcgcacactgccctcaaggac
cgcgccagccacctgctgccgatggccgccgaagcacgcaccgagctggaccagcgcctg
gagcaggcacttgcgcagttcaaggccgaccaggccaacgaacggcaactggagcagcaa
cgcaactggctcaatgagcagcgccagttgcacgcccagcatgctgaagccagccaagcc
ctggcggccgccgaacagcgctggcaggacctcgccgagcaacgtctggacctgcagcgc
ctggagcgcctggcgccacagcgccaccagttccatcgccagcagatgctgaacgcgcaa
ctggcgcccctggccgcgaccctcaccgatcagcagcgccagcaaggcgaactgctgacg
cgcaccagcgaactggagctggcactgcagacggcacgccaggcactggcacaccaccag
acccagcacagcgaacaggccccacgcgtgcgccaggcctacgccgcacaggacagcctg
gcgcgcctggagcaagagcaagtcgcgcagcgcagcgccagcgagcacgccgacctgcag
gttgccgaaggccagcagcaactgcagcaactggaagaccatcaacagcgcagcctgcag
cagttggcacaggtcgacaccgccctggccgacagccagcacctggagagcctggccaat
gcttggcaggcctacctgccgcaactcaagcaagtgatgctcacgggcgggcgcctggcc
aagggccgcgaagaactgcccggcctgcaggctcaggtcagccaggccaacgccaagctg
caggccgagcgcgacgccttcgacctgttgttccaggaagctggcgccgagccccaggcg
ctggcggagcagatcgacctgctcggcggcatgctgcaggacaaccgcaaacagcaacgc
gccgtcgaggagctgtcgcggttgcatggccgcgagctggaactgcgccagcagctcgat
accctgcgcgagcgccagcaacaggccatgcaacaacgccagcaactgatcggcgcaggc
accgcggccaaggcggagctggaagcagccgagcaggcgctcaccctcacccgccagttg
ctggcgcgccagcgcctggcccgtaacaccagcgtcgaggaactgcgagcccagttgcac
gacggcgagccgtgcccggtgtgcggcagcgccgagcacccgttccaccagcccgatgcc
ctgctgcagagcctgggccgccacgaccaggccgaagaggacgccgcgcagaagcaggtc
gaaaccctcaacaacaagctggtggagctgcgcacccaactgggcgtggtcaacgcccag
ctcaaggactaccagcagcagcatgcccaactgggcgagcaactgcagcctgtgcaggcc
caggtgcaggcccacagcctgtggccagcccttgcgcctcaggatgaccaggcgcgcagc
acctggctcgacagccaactgcgccggctcaacgatgaaatcaaccaggacgagaagcgc
cagggcgccctgctcaccctgcaaaaggaatctgcccgcctcaaccagcagctgcaagcg
gcgcagcaggcccagcagcaggcgcagcatcagctcgatcaccagcaccaggccctggcc
actgacgagcagcaactgcagcaagggctgagcgacctcgccagtgttctgccgcaggat
gtgctcaaggccctgagcgacgacccggcccacgccttcctcgccctcgaccagcagatc
gcccagcgcttgcagcacctggaacaacgcaaggacgagcagcaggagcagcaggcgcgc
caggtacagctcgacaagctgcgcgaccagcagcaggcacgcctgcagacgcagcagcaa
ctgcagcacaagctcgccgcgctggacgaacagcgtcagcaggcccaggcgtcactcgag
gcactgctgggccagcacgccagcgccgacgcctggcagcagcatctggatgcgcagctc
gaacaggcccgcaccgtcgacgccgacaccgctcaacgcctgcaggacttgcgtacccaa
ggcgtgcaactggccagcgaactcaaggccaatacccagcagcagcaagcactggaaagc
gaatgccagcaactgcaaggcgacattgcccaatggcgcgcagcacatccggaactggac
gatgccggcctggaccgcctgctggccatggacgatgcccagctcaacgacttgcgccaa
cgcctgcaaggcgccgaacgggccatcgaacaaggccgcgtgttgctccaggagcgcgac
caacgcctgctgcagcacgcggcgctgatgaccgtggaaagctcggccgaagccttggaa
caggccctgggcgaactgcgtgagcggctggcgggccatgagcagcagtgtgccgagttg
cgcgcgcagcaggccgacgaccagcgacgccagcaggcgcaccaggccctggccggcgag
atcgagcaggcgtaccaacaatggcagcgctgggcacgcctgaatgccctgatcggctca
gcgtccggcgatgtcttccgcaagatcgcccagggctacaaccttgacctgctgctgcac
cacgccaacgcccagttgcgccagctggcgcgccgctaccgcctcaagcgtggcggcagt
gccctgggcctgctggtgatggacaccgagatgggcgacgagctgcgctcggtgcattcg
ttgtccggtggcgagaccttcctggtgtcgctggccctggccctgggcctggcgtcgatg
gcatcgagcaccctgcgcatcgagtcgctgttcatcgacgaaggtttcggcagcctcgac
cccgagtcgctgcaactggccatggacgcgctcgacggcctgcaggcgcaggggcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcacgagcgcattccggtgcagatccaggtc
cgccgccagggtaatggcttgagtgatgtggaggtgtgcgggtga
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integrated database retrieval system
