Pseudomonas sp. KU43P: KU43P_41690
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Entry
KU43P_41690 CDS
T10397
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pskp Pseudomonas sp. KU43P
Brite
Transcription machinery [BR:
pskp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KU43P_41690 (rapA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBH47692
UniProt:
A0A5K7U0N6
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Position
4620181..4623027
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AA seq
948 aa
AA seq
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MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQARTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSSLWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASTEYSLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEQYRDLPAGEHAELYPEVAFQAQGEASDEERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIELHIPYLQDSP
QERLFQWYHDGLNAFLNTCPTGNALQHRFGPRLLPMLEGGDGKAWTALVAEARGERERLE
AELHSGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAKRISGGEEKILPTHVERVAEAQRRLAAEADEEL
ARLTALKAVNPSVRDSEIDTLRKQREDGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctggggaccatcctggcacaggatggccgcctgttgaccgtgctctacccggccactggc
gacacccgccagtattccctgcgcaatgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccatttcgaaggctggaagctgaccgtacgcgaggtcgaggacatcgac
gggctgatggtctatcacggcctcgatggccagaaccaggcgcgtaccctgccggaaacc
cagctgtcgaacttcatccagttccgcctcgccagcgaccggctgttcgccggccagatc
gacccactgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaaacagatg
cagtcgtcgctctggggcctgggtggctgccgcgcgcagccgatcgcccaccagttgcac
attgcccgagaagtggctgatcgcagcgcaccacgcgttctgctggccgacgaagtaggc
ctaggcaagaccatcgaggcgggcctggtgatccatcgccagttgctgtctggccgcgcc
agccgcgtgctgatcctggtgccggaaaaccttcagcatcagtggctggtggagatgcgc
cggcgcttcaacctgcaggtggcgctgttcgacgccgagcgattcatcgagagcgatgcc
agcaacccgttcgaagatgcccagttggcgctggtcgccctggaatggctggtcgacgac
gaaaaggcccaggatgccttgttcgccgcaggctgggatctgatggtggtcgacgaggcc
catcacctggtctggcacgaagaacaggccagcaccgagtacagcctggtcgagcaactg
gctcaggtcatccctggcgtgctgctgctcaccgccacacccgagcaactgggccaggac
agccacttcgcgcgcctgcgtctgctcgaccccaaccgtttccatgacctggccgcgttc
cgcgccgagagcgagcactatcgcccggtggccgaagcggtacaggagttgctcgatgaa
ggccgcctgtcgcccaaggcccacgccaccatccagggtttcctgggtgccgaaggtgaa
gccctgctggctgcggtcagcgacggcgacagccaggccagcgcgcgcctgatccgcgaa
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaacacccgcgcggccatccag
ggcttccccgagcgccagctgcatccctacccgctggccaacccggagcagtaccgtgat
ctgccagccggcgagcatgccgagctgtacccggaagtcgccttccaggcccagggcgag
gccagcgatgaagagcgctggtggcgtttcgacccacgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaagtcctggtgatctgcgcccatgccgaaaccgccatg
gacctggaagatgccctgcgcgtgcgttccggtatcccagccacggtgttccacgaaggc
atgagcatcctcgaacgtgaccgtgcggcggcgtacttcgccgacgaggagttcggcgcc
caggtgctgatctgctccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccggcccaccccgacctgctcgaacagcgcatcggccgcctt
gaccgtatcggccagaagcacaccatcgaattgcacatcccgtacctgcaggacagcccg
caagaacggctgttccagtggtaccacgacggcctcaacgccttcctcaatacctgcccg
accggcaacgccctgcaacatcggttcggccctcgcctgctgccgatgctcgaaggtggc
gacggcaaggcatggaccgcactggtggccgaagcccgtggcgaacgcgagcgtctggaa
gccgaactgcacagcggtcgcgaccgcctgctggagctcaactccggcggcgcgggtgaa
ggccaggccctggttgaagcgatcctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccttgttcgacgcctttggcatcgacagcgaagaccactcggaaaacgcactg
atcctcaagccgagcgagaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacctacgaccgcgcccaggcgctgtctcgcgaagacatgcagttcctcacc
tgggaacaccccatggtgcagggcggcatggacctggtgctgtctggttcgatgggcaac
accgctgtcgccctgatcaagaacaaggcgctgaaaccgggcaccgtgctgctggagctg
ctgttcgtcagtgaggtggtggcgccacgcagcctgcagcttggccgctacctgccacca
gcggcgctgcgctgcctgctcgatgccaacggcaacgacctggcctcgcgcgtagccttc
gaaacgctcaacgaccagcttgaaagcgtgccacgggcaagcgccaacaagttcgtgcag
gcccagcgtgacgtgctggccaagcgcatcagtggcggtgaagagaagatcctgccgacc
cacgtcgaacgcgtggccgaggcgcaacgccgcctggccgccgaagccgatgaggaactg
gcgcgcctgacggcgttgaaagccgtcaacccgagcgtgcgcgacagcgaaatcgacacc
ctgcgcaagcagcgtgaagatggcctggcgatgctggaaaaggcggcgctgcgcctggaa
gcgatccgcgtgctggttgcaggttaa
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