Pseudomonas sp. KU43P: KU43P_42650
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Entry
KU43P_42650 CDS
T10397
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KU43P_42650 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_42650 (recO)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KU43P_42650 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KU43P_42650 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BBH47788
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All DBs
Position
complement(4733076..4733759)
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AA seq
227 aa
AA seq
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MEQPVAQPAYVLHSRAYKETSALVDFFTPQGRMRAVLRRARGKGGSLVRPFVPLEVELRG
RGELKNVGRLDSVGIAAWLHGDALFSGLYLNELLMRLLPAEAPQPELFEHYALTLQALAA
GRSLEPLLRAFEWRLLDDLGYAFSLHHDINDDPIAADGLYRLQVDAGLERVYLVQPGLFN
GAELLALAQADWQAPGALLAAKRLMRQALAVHLGSKPLVSRELFRKR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacccgtcgcccagccggcctacgtgctgcatagccgcgcctacaaggaaacc
agcgcgctggtggacttcttcacccctcagggccgcatgcgcgcggtgttgcgccgggcg
cggggcaagggcggcagcctggttcggccgttcgtgccgcttgaagtggaactgcgcggg
cgcggcgagctgaagaatgtcgggcggctggacagcgttggcatcgctgcctggctgcac
ggcgatgcgctgttcagtggcctgtacctcaatgagctgctgatgcgcctgctgcctgct
gaggcgccccaacccgagctgttcgagcattacgccctgaccctgcaggcgctggccgcc
gggcgttcgttggagccgctgctgcgtgccttcgaatggcgcctgctggatgatctcggg
tacgccttctcgctccaccacgacatcaacgatgacccgatcgccgccgatggcctctat
cgcttgcaggtcgatgccggccttgagcgggtgtacctggtgcagcctggcctgttcaat
ggtgccgagctgctggccctggctcaggccgactggcaggcacccggcgccttgcttgcg
gccaagcgcctgatgcgccaggcactggcagtgcacctggggtcgaaaccactggtcagc
cgggaactgtttcgcaagcgctga
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