Pseudomonas sp. KU43P: KU43P_42670
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Entry
KU43P_42670 CDS
T10397
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KU43P_42670 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pskp03019
]
KU43P_42670 (rnc)
03009 Ribosome biogenesis [BR:
pskp03009
]
KU43P_42670 (rnc)
03036 Chromosome and associated proteins [BR:
pskp03036
]
KU43P_42670 (rnc)
Enzymes [BR:
pskp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KU43P_42670 (rnc)
Messenger RNA biogenesis [BR:
pskp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KU43P_42670 (rnc)
Ribosome biogenesis [BR:
pskp03009
]
Eukaryotic type
90S particles
RNase
KU43P_42670 (rnc)
Prokaryotic type
rRNA processing factors
KU43P_42670 (rnc)
Chromosome and associated proteins [BR:
pskp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KU43P_42670 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BBH47790
LinkDB
All DBs
Position
complement(4734708..4735397)
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AA seq
229 aa
AA seq
DB search
MSASLARLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDSILNFVAAEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILAWLTDEFESLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccttgcccgtctcgagcgcaagctcggttacaccttcaagaatcaggac
cagatgctgctggccctgactcaccgcagctacgccgggcgcaacaacgagcgcctggag
tttctcggtgactccattctcaacttcgtcgccgccgaggcgctgttcgagcgcttcccg
caggcccgcgaaggccagctgtcgcgcctgcgtgcccgcttggtcaaaggcgaaaccctg
gcccgcctggctcgtggcttcgacctgggtgaatacctgcgcctgggctcgggtgagctc
aagagcggtggctttcgccgcgagtcgatcctggcggacgccctggaagcgctgattggt
gccatctatctggacgccgacatgcagaccgcgcgcgagcgcattctggcctggctgacc
gacgagttcgaaagcctgacgctggtcgacaccaacaaggacccgaaaacccgcctgcag
gaattcctgcagtcgcgtagctgcgaactgccacgttatgaggtggtggacatccagggc
gaaccgcactgccgtaccttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggccagggcgttagccggcgtattgccgagcaagtcgctgccgccgccgcattgatc
gccctgggcgtggagaatggcaatgactga
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