KEGG   Pseudomonas sp. KU43P: KU43P_42670
Entry
KU43P_42670       CDS       T10397                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pskp  Pseudomonas sp. KU43P
Pathway
pskp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pskp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KU43P_42670 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pskp03019]
    KU43P_42670 (rnc)
   03009 Ribosome biogenesis [BR:pskp03009]
    KU43P_42670 (rnc)
   03036 Chromosome and associated proteins [BR:pskp03036]
    KU43P_42670 (rnc)
Enzymes [BR:pskp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     KU43P_42670 (rnc)
Messenger RNA biogenesis [BR:pskp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KU43P_42670 (rnc)
Ribosome biogenesis [BR:pskp03009]
 Eukaryotic type
  90S particles
   RNase
    KU43P_42670 (rnc)
 Prokaryotic type
  rRNA processing factors
   KU43P_42670 (rnc)
Chromosome and associated proteins [BR:pskp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     KU43P_42670 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: BBH47790
LinkDB
Position
complement(4734708..4735397)
AA seq 229 aa
MSASLARLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDSILNFVAAEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILAWLTDEFESLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagtgcttcccttgcccgtctcgagcgcaagctcggttacaccttcaagaatcaggac
cagatgctgctggccctgactcaccgcagctacgccgggcgcaacaacgagcgcctggag
tttctcggtgactccattctcaacttcgtcgccgccgaggcgctgttcgagcgcttcccg
caggcccgcgaaggccagctgtcgcgcctgcgtgcccgcttggtcaaaggcgaaaccctg
gcccgcctggctcgtggcttcgacctgggtgaatacctgcgcctgggctcgggtgagctc
aagagcggtggctttcgccgcgagtcgatcctggcggacgccctggaagcgctgattggt
gccatctatctggacgccgacatgcagaccgcgcgcgagcgcattctggcctggctgacc
gacgagttcgaaagcctgacgctggtcgacaccaacaaggacccgaaaacccgcctgcag
gaattcctgcagtcgcgtagctgcgaactgccacgttatgaggtggtggacatccagggc
gaaccgcactgccgtaccttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggccagggcgttagccggcgtattgccgagcaagtcgctgccgccgccgcattgatc
gccctgggcgtggagaatggcaatgactga

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