Pseudomonas sp. KU43P: KU43P_43320
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Entry
KU43P_43320 CDS
T10397
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pskp Pseudomonas sp. KU43P
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_43320
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
KU43P_43320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
CbiA
ResIII
T2SSE
AAA_30
AAA_10
TrwB_AAD_bind
AAA_19
AAA_25
AAA_7
nSTAND3
P-loop_TraG
SRP54
AAA_6
nSTAND_NTPase5
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
BBH47855
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Position
complement(4808748..4810223)
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AA seq
491 aa
AA seq
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MPDSSTIVIGAGTDGQPVKQAMRLANRHGLVAGATGTGKTVTLQHLAEVFSDAGVAVFAA
DVKGDLCGLGAAGAPQGKVAERIAGMPWLGHQPRAYPVTLWDIAGQSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFKVADRDGLLLLDLKDLKALLAHLKDNPQLLGDDSALMTS
GSTQALLRRLATLEQQGAEALFGEPALQLEDLLRPDGDGRGRIHLLDASRLVHDAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDTVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDSLAVLTEL
GIGEALVGTLEDKGTPAMVQRVLIAPPQSRIGPLSGAERAALIAASPLLGRYDKPVDRES
AYEMLTQRKGEPVAPAPVPKADEASLADKAGDFLQSAAGQAIKSAVRQAANQLGRQLVRG
LMGSLLGGKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccggattcttcgaccatagtcataggcgctggcacggatggccagccggtcaagcaa
gccatgcgcctggccaatcgccatgggttggtggcgggcgccaccggtaccggcaagacc
gtgaccttgcagcacctggcggaagtgttcagtgatgctggcgtggcggtgttcgcggcc
gatgtcaaaggtgacctctgcggcctcggtgcagcgggtgcgccgcagggcaaggtggcc
gagcggatcgccgggatgccttggcttggtcatcagccgcgagcctacccggtgaccttg
tgggacattgccgggcaatcgggccacccgctgcgtaccacgctcagtgaaatgggcccg
ttgttgcttggcaacctgctcgagctgaccgacagccagcaggcggcgctgtatgcggcg
ttcaaggtggctgaccgtgatgggctgttgctgctcgacctcaaggacctcaaggcgctg
ctcgcgcacctgaaggacaacccgcagctgttgggtgacgatagcgccttgatgaccagt
ggctcgactcaggcactgttgcggcgtctggctacgttggagcagcagggggccgaggcg
ctgttcggcgagccggccctgcagctcgaagacctgctgaggcccgacggcgatgggcgg
gggcgtattcatctgctcgacgccagccgtctggtgcatgacgcgcccaaggtctacgcc
accttcctgctgtggttgctggccgaactgtttgagcaattacctgagcgaggcgatgcc
gacaaaccggtcctggcgctgttctttgacgaggcgcacttgctgttcaacggtactccc
aaggcgttgcaggaccggctggagcaagtagtacggctgatccgttccaaaggcgtgggt
gtgtatttcgtcacccagtcgccgggcgacttgcctgataccgtgctggcgcaactgggt
ttgcgcatccagcatggtttgcgtgcatttaccgccaaggagcagaagtcgctgcgcgcg
gtggccgatggctttcgcccgaacccggctttcgacagcctggcagtgcttacggagttg
ggcatcggcgaggccctggtcggcaccctggaagacaagggcacgcctgcgatggtgcag
cgtgtgctgatcgcgccgccgcaatcgcgcatcgggcctctgagcggcgccgaacgggct
gcattgattgccgcttcgccgctgcttgggcgctacgacaagccggtcgatcgggagtca
gcctatgaaatgctgacccagcgcaagggcgagccggtagcgccggcgccggtgccgaag
gccgacgaagcgagcctggccgacaaggccggggacttcctgcagagtgcggcaggtcag
gcgatcaagtcggcggtgcgccaggcggcgaaccagctggggcggcagttggtgaggggg
ttgatggggtctttgttggggggcaagaagcggtag
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