KEGG   Pseudomonas sp. KU43P: KU43P_44900
Entry
KU43P_44900       CDS       T10397                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pskp  Pseudomonas sp. KU43P
Pathway
pskp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pskp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KU43P_44900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pskp03021]
    KU43P_44900
Transcription machinery [BR:pskp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KU43P_44900
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_7 HTH_23 HTH_24 HTH_IclR HTH_28 HTH_29 GerE TnsD PhyR_sigma-like DUF2089 HTH_10 LacI Xre-like-HTH YdaS_toxin DUF1492 HTH_38 HTH_20 HTH_36 HTH_3 HTH_11 MarR Phage_NinH HTH_17 CENP-B_N HTH_26 HTH_5
Other DBs
NCBI-ProteinID: BBH48013
LinkDB
Position
4980523..4981017
AA seq 164 aa
MSSALSSTVEGLYHAHHNWLTGWLRRRLGCPQSAADLAQDTYVRLLQAREAPQLVEPRAF
LATVAKRVLCNHFRRQELERAYLEALAQVPESVAPSEEQKAIIFETLLELDRLLDGLPPL
VKRAFLLAQIDGMGQSEIARELGISLATVKRYLNKAALRCYFAL
NT seq 495 nt   +upstreamnt  +downstreamnt
gtgtccagcgccctctcttccacggtcgaaggtctctaccacgcccatcacaactggctg
accggctggctgcgccgtcgcctgggctgcccgcaaagcgccgccgacctggcccaggac
acctatgtgcgcctgctgcaggcgcgcgaagcgccgcaactggtcgagcctcgcgccttc
ctcgccaccgttgccaagcgtgtgctgtgcaaccacttccgccgccaggagctggaacgc
gcctacctcgaggccctggcccaggtaccggagagcgtcgccccgagcgaagagcagaag
gcgatcatcttcgaaaccctgctggagctcgaccgcttgctcgatggcctgccgcccctg
gtcaagcgcgcgtttctcctggcccagatcgatggcatgggccagagcgagatcgcccgc
gagctgggcatttcgctcgccacggtcaaacgctacctgaacaaggcagccctgcgctgc
tacttcgccctgtga

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