Pseudomonas sp. KU43P: KU43P_46240
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Entry
KU43P_46240 CDS
T10397
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KU43P_46240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pskp03019
]
KU43P_46240 (pnp)
03016 Transfer RNA biogenesis [BR:
pskp03016
]
KU43P_46240 (pnp)
Enzymes [BR:
pskp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KU43P_46240 (pnp)
Messenger RNA biogenesis [BR:
pskp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KU43P_46240 (pnp)
Transfer RNA biogenesis [BR:
pskp03016
]
Prokaryotic type
tRNA degradation factors
KU43P_46240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
KH_2
KH_N4BP1_2nd
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
BBH48147
UniProt:
A0A5K7U262
LinkDB
All DBs
Position
complement(5127454..5129559)
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLQASSLDMVV
AGTESAVLMVESEAQELTEDQMLGAVLFAHDEFQSVIQAVKELAAEAGKPTWDWKPATAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAVAKFSGEEGQPSASEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIAQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcaatcgaccgttactctcgaaacgggc
cgcatcgcccgtcaggcgaccggcgccgtgctggtgaccgtcgacaacgacgttaccgtg
ctggtgaccgtggtcggcgccaagcaggctgacccaggcaagggcttcttcccgctgtct
gtccactaccaggaaaagacctacgctgcgggcaagatcccaggtggtttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttccctgaaggcttcatgaacgaagtccaggtcgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccgttcgaaggcccgatcggcgctgcccgcgttgccttccacgagagcacc
ggctacctgctgaacccgacctacgaacagctgcaggcttcgagcctggacatggtcgtt
gccggtaccgaatctgctgtgctgatggttgaatcggaagcccaagagctgaccgaagac
cagatgctgggcgccgtactgttcgcccacgatgaattccagtcggtcatccaggctgtc
aaagagctggctgcagaagcgggcaagccgacctgggattggaaaccggctactgccaac
accgagctgttcaacgccatccgcgctgaattcggcgaagcggtttcccagggctacacc
atcaccgtcaaggccgaccgttacgcgcgcctgggcgagctgcgcgaccaggcggtcgcc
aagttctccggtgaagaaggccagccttctgcttccgaagtcaaagacatcttcggcgaa
atcgaataccgcaccgttcgcgagaacatcgtcaacggcaagccgcgtatcgatggtcgt
gacaccaagaccgttcgtccgctgaacatcgaagtcggcgtgctgccgaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccttgggtactgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagacccgttcatgctgcac
tacaacttcccaccgttctcggtaggcgaatgtggtcgtatgggtggcgctggccgtcgt
gaaatcggtcacggtcgcctggctcgtcgttcggttcaggccatgctgccagccgctgat
gtgttcccatacaccatccgcgttgtatcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgcggtgcttccctggctctgatggacgccggtgtaccaatgaaagcg
ccggttgccggtatcgccatgggtctggtcaaggaaggcgagaagttcgcggtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcgcccaatcgcgcaccgagctgtcggccaacgcgccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccatccgcgccatc
tgcgaagaaaccaaggcctcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gaaaccaaggaagcggccgaggcagctcgccagcgcgtcctgggcattactgccgaagcc
gaaatcggcaagatctacgttggcaaggtcgagcgtatcgtcgactttggcgccttcgtg
aacatcctgccgggcaaagacggcctggtacacatctccatgctcagcgatgcgcgcgtg
gagaaggtgaccgacgttctgaaagaaggtcaggaagttgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaagacgttgccgcagccaaggcttccggc
gtgtaa
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