Pseudomonas sp. KU43P: KU43P_47560
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Entry
KU43P_47560 CDS
T10397
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KU43P_47560 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_47560 (xseB)
Enzymes [BR:
pskp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KU43P_47560 (xseB)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KU43P_47560 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
BBH48279
UniProt:
A0A5K7U350
LinkDB
All DBs
Position
5276188..5276430
Genome browser
AA seq
80 aa
AA seq
DB search
MARKKASIDFEQSLADLQALVERLENGELSLEDSLAAFEQGIALTRDCQGALAQAEQKVQ
ILLERDGELAAQPFDAEPEA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagcctccatcgatttcgagcaatccctcgccgacctgcaagccctg
gtcgagcgcctggagaacggcgagttgtcgctggaagactcgctggccgccttcgagcag
ggcattgccctgacccgcgattgccaaggcgccctggcccaggccgagcagaaggtgcag
atccttctggagcgcgacggcgagctcgccgcgcagcccttcgatgcggagcctgaagca
tga
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