Pseudomonas sp. KU43P: KU43P_47880
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Entry
KU43P_47880 CDS
T10397
Symbol
selB
Name
(GenBank) selenocysteine-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pskp Pseudomonas sp. KU43P
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pskp03012
]
KU43P_47880 (selB)
Translation factors [BR:
pskp03012
]
Eukaryotic type
Elongation factors
KU43P_47880 (selB)
Prokaryotic type
KU43P_47880 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
WHD_2nd_SelB_bact
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
RsgA_GTPase
EIF_2_alpha
Motif
Other DBs
NCBI-ProteinID:
BBH48311
LinkDB
All DBs
Position
complement(5304670..5306592)
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AA seq
640 aa
AA seq
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MIVGTAGHIDHGKTALLKALTGQAGDQRREERDRGMTIDLGYRYAALSEGAPLTGFIDVP
GHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQALVAISKCDRVEA
ARLAEVQAQVAELLAPGPYAGARQFPLSSVTGEGIEALRQALLEAETRVRQRSVRSGFRL
AVDRAFAVAGAGVVVTGTALAGRVSAGDTLLLGKAGKAVRVRGLHAQNQAALVAEAGQRV
ALNIAAERLAVEQVHRGDWLVPEWLRAPSVRVDIELQLLSNELRAFEHFSAVHVHLGTQD
VTARVALLEGETLGAGQRMFAQLLLNAPLQAVHGDRLVLRDQRAQRTLGGGRVLDPFAPS
RQRRSEERLRQLQVLRDAGDLEQALSSLLANAPGGLDPQRLERQFNRLRETWQLPEDVLV
VATRQGQLLFAHRQWQALKRQVLEQLARFHEQEPDQLGPDRDRLRRFAALPLERPAFVSL
LDELLNDAVVATSGPWLHLPDHKVQLSEADSALWARLQPRLLEGQYDPPWVRTLAAEEKC
AEADVRLLLRKLARLGLVHQVVRDLFYPEKTLQRMAELLLAQARTTPIVQVAAFRDMLGI
GRKRSVQILEYFDRIGLTRRVADQRHIRADSALAQQQARH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtgggtaccgctggccacatcgaccatggcaagactgcgctgctcaaggcgctg
accggccaggcaggcgaccagcgccgggaggaacgtgaccgcggtatgaccatcgatctc
ggctaccgctacgccgcgctgagcgaaggcgcgccgctgaccggttttatcgatgtgccg
ggccatgaacgttttatccacaacatgctggcgggcgcccatggcatcgacttggtgctg
ctggtggtggcggccgatgacggcgtgatgccgcagacccgcgaacacctggcgatcatc
gagttgctgggcattccccaggcgctggtggccatcagcaaatgcgacagggtcgaggcg
gcacgtctggctgaagtgcaggcgcaagtggccgagctgctggcgccggggccgtatgcg
ggggcacggcagtttccgttgtcgagtgtcacgggtgagggcatcgaagcgttgcgccag
gcgttgttagaggctgaaacacgtgttcggcaacgcagtgtacgcagcggttttcgtctg
gcagtggaccgcgctttcgcggtggcgggggctggggtggtggtgaccgggacggcgctg
gccgggcgggtcagtgcaggcgatacgttgttgttgggcaaggccggcaaagcggtgcgg
gtgcgtggcctgcatgcgcagaaccaggctgccttggtggccgaggccggccagcgggtg
gcgctgaatatcgccgccgaacgcctggcggtggagcaggtgcaccggggagactggttg
gtgcccgagtggctgcgtgcgcccagcgtgcgtgtggatatcgaactgcagctgctgtcg
aacgagcttcgtgccttcgaacacttcagcgccgtgcacgtgcacctgggcactcaggat
gtgacggcgcgggtggccttgctcgaaggcgagaccttgggcgccggccagcgcatgttc
gcccaattgctgctcaacgcgccgctgcaggccgtgcacggcgatcgcctggttctgcgt
gatcagcgtgcgcagcgaacgctgggtggcggcagggtgctcgacccttttgctccgagc
cggcagcgtcgcagcgaagagcgccttcggcagttgcaggtgctgcgtgatgcaggcgat
ctggagcaagcgctttcgtcactgcttgccaacgcccccggcggccttgatccacagcgc
ctggagcggcagttcaatcgtctgagggaaacctggcagctgccagaggacgtgctggtg
gtagccactcggcagggccaattgctgttcgcccatcgccagtggcaggcactcaagcgc
caggtgctggagcagttggcacgcttccacgagcaggaacccgaccagctggggccggac
cgtgaccggttgcgccgttttgcggccttgccgctggagcgcccggcgttcgtcagcctg
ctggatgagctgctcaacgacgcggtggtcgccactagcgggccgtggctgcacctgccc
gatcacaaggtgcaactgagcgaggccgacagcgccttgtgggcgcgcctgcagcccagg
ttactggagggtcagtacgatccgccctgggtcaggacgttggccgctgaagaaaaatgc
gcagaagccgatgtgcgcctgttgctgcgcaagctggcgcggctgggcctggtgcaccag
gtggtgcgggacctgttctaccccgagaagacgctacagcgcatggcagagctgttgctt
gcgcaggccaggaccacgccgatagtgcaggtagcggcgtttcgcgatatgttgggcatc
ggtcgcaagcgcagtgtgcagattctggaatacttcgaccgcatcggcctgacccgcagg
gttgccgatcagcgtcacatccgtgccgacagcgcactggcccagcagcaggccaggcac
tga
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