Pseudomonas sp. KU43P: KU43P_49300
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Entry
KU43P_49300 CDS
T10397
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03030
DNA replication
pskp03430
Mismatch repair
pskp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KU43P_49300
03430 Mismatch repair
KU43P_49300
03440 Homologous recombination
KU43P_49300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pskp03032
]
KU43P_49300
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_49300
Enzymes [BR:
pskp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KU43P_49300
DNA replication proteins [BR:
pskp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KU43P_49300
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KU43P_49300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBH48453
LinkDB
All DBs
Position
5461540..5462250
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AA seq
236 aa
AA seq
DB search
MSLFAWLRPVSVPLDDAVRERLSRLPKPAPLGVCSLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFSQQFERTLHRPTQKTNASVLIHGLGPSALAAGCDPAEALLDLLEFIG
TSPVLAFHAPFDQRMLARALKESLGHRLQQHFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQIEERHHASADAQVTAELALILLSQARRQQLDSPLQLEQRVRGWRRRKLQSHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgcccggtcagcgtgccgctcgacgatgccgtgcgcgaa
cgactgtcgcgcttgcccaagccagcgccgttgggcgtatgttcattgcgcgagcaacgc
tgggtggtgctcgacctggaaaccagcggcctgaaccccaatcgagatcaggtactgtcg
atcggcgccgtggccatcgaagacggtgccatcgacttttcccagcaattcgagcgcacc
ctgcaccggccgacgcagaagaccaacgccagcgtgctgatccacgggctggggcccagt
gccctggctgcgggatgtgaccccgctgaagccctgctcgacctgctcgagttcatcggt
accagcccggtactggccttccatgcgccgttcgatcaacgcatgctggcccgggcattg
aaggaaagccttggtcaccggctacagcagcattttctcgacgtggccgagctggccccg
atgctcaaccccgataccgtattgcgcgaggccgggctggacgactgggtcgcgcgcttc
ggcctgcagatcgaagaacgccaccatgccagcgccgatgcgcaggtgacggcggagctg
gccctgattctcctgagccaggcgcgccggcagcagctcgatagcccgttgcaactggaa
cagcgcgtgcgtgggtggcggcggcgcaaattgcagagccacggcctttga
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