Pseudomonas sp. KU43P: KU43P_52330
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Entry
KU43P_52330 CDS
T10397
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03420
Nucleotide excision repair
pskp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KU43P_52330 (uvrD)
03430 Mismatch repair
KU43P_52330 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_52330 (uvrD)
Enzymes [BR:
pskp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KU43P_52330 (uvrD)
DNA repair and recombination proteins [BR:
pskp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KU43P_52330 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KU43P_52330 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
AAA_22
DUF5681
Motif
Other DBs
NCBI-ProteinID:
BBH48756
LinkDB
All DBs
Position
5803139..5805325
Genome browser
AA seq
728 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQASGDLFLQTMRDVYSAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHLLVDEFQDTNAVQYAWLRLLA
GKHGGSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANAL
IANNSGRLGKELWTDLGEGEPLTLYAAYNEHDEARYVVETIESLIKGGSSRSDIAILYRS
NAQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPR
GIGEKTVEAIREHARHSQLSMWEAMCQLIAAKALKGRAAGALGAFIELIENLAGKVADMP
LHTMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFEASEDDADLSPLSAFLG
HASLEAGEAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEER
RLAYVGITRAMRQLIMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGG
SQSSTSSLFANASIPQTAFSLGQRVQHSVFGEGVILNFEGSGAQARVQVNFAEGSKWLML
GYAKLEAI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagacgacctctccctcctgctcaattccctcaacgatgcccaacgtcaggct
gtcgcggccacgctcgggcgccaactggtgcttgcgggcgccggttccggtaaaacccgc
gtgctggtgcaccgcatcgcctggctgatccaggtggagcaggcctcgccgcactcgatc
ctgtcggtgaccttcaccaacaaggctgccgccgagatgcgccagcggatcgagcaactg
ctgggcatcaacccggcaggtatgtgggtcggcaccttccacggcctggcgcaccgcctg
ttgcgggcgcactggcaggaagcccgcctggtacagaacttccagattctcgacagcgat
gaccagcagcgcctgatcaagcgggtgatgcgcgaactcggcctggacgagcagaaatgg
cccgcgcgccaagcgcagtggttcatcaacgggcagaaggacgagggcctgcggccacag
catatccaagccagcggcgacctgttcctgcagaccatgcgtgatgtctacagtgcctac
gaacaggcctgtgagcgtgccggggtcatcgacttctccgaattgctgcttcgcgccctc
gacctgtggcgcgaccaccctggtctgttggagcactaccagcggcgcttccgccatctg
ctggttgacgaattccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggca
ggcaagcatggcggcagcctgatggcggtgggcgacgacgaccagtcgatctacggctgg
cgcggcgccaagatcgagaacatccaccagtacacagccgacttccccgacgccgagatg
atccgcctggagcagaactaccgctccaccggtggcatcctcaaggccgccaacgccctg
atcgccaacaacagcgggcgcctgggcaaggaactgtggaccgacctgggcgaaggcgag
ccgctgaccctgtatgcggcctataacgagcacgatgaagcgcgttatgtggtggaaacc
atcgagagcctgatcaagggcggcagctcgcgcagcgatatcgccattctgtaccgctcc
aacgcccaatctcgggtactcgaagaggccctgctgcgcgagcgcattccctaccgcatc
tatggtggccagcgattcttcgaacgcgccgaaatcaagaatgccatggcttatctgcgc
ctgctcgaaggacgcggcaacgacgcggcactagagcgggtcatcaacgtgccaccccgc
ggcattggcgagaagaccgtcgaagccatccgcgagcatgcccgtcacagccagctatcc
atgtgggaagcgatgtgtcagctgattgccgccaaggcactcaaaggccgtgcagccggt
gctctgggtgcgttcatcgaattgatcgaaaacctggccggcaaagtggcggacatgcca
ttgcacacgatgacccaaacggtcatcgagcagtccgggctgatcatctatcaccaagaa
gaaaaaggtgaaaagggccaggcacgggtagaaaaccttgaggaactggtcagtgcagcg
cgcaacttcgaggccagcgaagacgacgccgacctctcgccgctctcggccttcctcggc
cacgcctcactggaagcgggtgaagcccaggccgacgaacacgaagacagcattcagttg
atgaccctgcacagcgccaagggcctggaattcccctacgtgttcctcgtgggcatggaa
gaagggctgtttccgcacaagatgagcctggaagagcccggccgccttgaagaggaacgc
cgcctggcctatgtgggcatcacccgcgccatgcgccagctgatcatgacctacgccgag
acgcggcgcctgtatggcagcgagacctacaacaaggtgtcgcgcttcgtcagggaaatt
ccggcagggctggttcaggaagtacgcttgtccaacagtgtcagccgcccgttcggaggt
tcgcagagcagcaccagtagcctgttcgccaacgccagcattccgcagaccgccttcagc
cttggccagcgcgtgcagcattcggtattcggtgaaggggtcatcctcaacttcgaaggt
tccggtgcccaggcgcgggtgcaggtgaactttgccgaaggcagcaagtggctgatgctg
gggtacgccaagctcgaggcgatctga
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