Pseudomonas sp. KUIN-1: KUIN1_00960
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Entry
KUIN1_00960 CDS
T09878
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku00250
Alanine, aspartate and glutamate metabolism
psku00310
Lysine degradation
psku00350
Tyrosine metabolism
psku00650
Butanoate metabolism
psku00760
Nicotinate and nicotinamide metabolism
psku01100
Metabolic pathways
psku01120
Microbial metabolism in diverse environments
Module
psku_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KUIN1_00960 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KUIN1_00960 (gabD)
00310 Lysine degradation
KUIN1_00960 (gabD)
00350 Tyrosine metabolism
KUIN1_00960 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KUIN1_00960 (gabD)
Enzymes [BR:
psku01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KUIN1_00960 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KUIN1_00960 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KUIN1_00960 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
BBN60906
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All DBs
Position
complement(109758..111200)
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AA seq
480 aa
AA seq
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MQLKDSTLFRQQAYINGQWLDADGGQSIKVNNPANNEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERGNKLRRWFELMIENQDDLGLLMTLEQGKPLAEAKGEITYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAERAGIPAGVFSVVTGSAGDIGAELTGNPIVRKLSFTGSTDIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAMISKYRNNGQTCVCANRIYVQDA
VYDAFAEKLKAAVGKLKIGNGLEEGVTTGPLIDDKAVAKVKEHIADAVSKGATVLTGGNS
LEGSFFEPTILVNVSKDAAVAREETFGPLAPLFRFKDEAEVIAMANDTEFGLASYFYAQN
MSRVFRVAEALEYGMVGINTGLISNELAPFGGIKSSGLGREGSKYGIEDYLEIKYLCLSV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagattccacactgttccgccagcaagcctacatcaacggccaatggctg
gacgcggacggtggtcagtcgatcaaggtcaacaacccggccaacaatgaaatcctcggc
actgtgccaaaaatgggcgcagccgagacgcgtcgggcgattgaggcggctgacaaggcg
ctgccggcctggcgtgcgctgactgccaaggagcgtggcaacaagctgcgccgctggttc
gagctgatgatcgagaaccaggacgatctgggtctgctgatgacgctggagcagggcaag
ccgctggccgaagccaagggcgagatcacctatgcggcgtcgttcatcgagtggttcgcc
gaagaagccaagcgtgtctatggcgacgtgattcctggtcaccagccggacaagcgcctg
atcgtgctcaagcagccgattggtgtgacggcggcgatcaccccgtggaacttcccggcg
gcgatgatcacccgcaaggccggtccggcactggcggcgggttgcaccatggtgctcaag
cctgcgtcgcaaacgccgttctcggcactggcactggctgaactggccgagcgtgcgggt
atcccggctggcgtgttcagcgtggtgaccggcagcgcaggcgatatcggtgccgagctg
accggtaacccgatcgtgcgcaaactgtccttcaccggctcgaccgacattggtcgccag
ctgatggccgagtgcgccaaggacatcaagaaggtgtccctggagctgggcggtaacgcg
cctttcatcgtgttcgacgatgccgacctcgacaaggcggtcgaaggcgcgatgatctcc
aagtaccgcaacaacggccagacctgcgtgtgcgccaaccgcatctacgtgcaggacgcg
gtgtatgacgcgttcgccgagaagctcaaggcggcggtcggcaagctgaagatcggtaac
ggcctggaagaaggcgtcaccaccggcccgttgatcgacgacaaggcggtggccaaggtc
aaggagcacatcgccgacgccgtcagcaagggcgcaaccgtgctgaccggtggcaacagc
ctggaaggctcgttcttcgagccgaccattctggtcaacgtgtctaaagatgccgccgtg
gcgcgggaagaaacctttggtccgctggccccgctgttccgcttcaaggacgaggccgaa
gtgattgcgatggccaacgacaccgagttcggtctggcgtcgtacttctacgcgcagaac
atgagccgcgtgttccgtgtcgccgaggcgctggaatatggcatggtgggtatcaacacc
ggcctgatctccaacgaactggcaccgttcggcggtatcaagtcgtccggcctgggccgt
gaaggctccaagtacggcatcgaagattatctggaaatcaaatacctctgcctgtcggtc
tga
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