Pseudomonas sp. KUIN-1: KUIN1_01720
Help
Entry
KUIN1_01720 CDS
T09878
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku00300
Lysine biosynthesis
psku00470
D-Amino acid metabolism
psku01100
Metabolic pathways
psku01110
Biosynthesis of secondary metabolites
psku01120
Microbial metabolism in diverse environments
psku01230
Biosynthesis of amino acids
Module
psku_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KUIN1_01720 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KUIN1_01720 (dapF)
Enzymes [BR:
psku01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KUIN1_01720 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BBN60982
LinkDB
All DBs
Position
193414..194244
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVDM
GPPRFVPEEIPFEAAEQATCYTVDVDGQHVDMAAVSMGNPHAVLRVDDINNAPVHELGPK
IEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggtaacgacttcatggtcctggacctt
gtgagtcagcacgcgcatatcttgcccaagcacgccaaacaatggggcgaccgccacacc
ggtatcggtttcgatcagcttttgctggtcgaggcgccgaacaacccggatgtggacttt
cgctatcgaatcttcaattccgacggctccgaagtcgaacagtgcggcaacggcgcgcgc
tgctttgcccgtttcgtactcgacaagcgcctgacggccaagaagcagatacgcgtcgag
accaagagcggcatcatcgaactggatatccgcagcgacgggcagatcagcgtcgatatg
gggccgcccaggtttgtccctgaagagattcccttcgaagcagcggagcaggctacctgt
tacaccgttgacgtcgacggtcagcatgtcgacatggcggctgtgtccatgggcaatccg
cacgctgtgctgcgggtcgatgacatcaataacgcaccggtgcatgaactggggccgaag
atcgagcatcacccgcgctttccggcccgggtcaacgtcggctttctccacgtcgtggac
cgtcagcgggcacagctgcgtgtctgggaacgcggtgccggggaaacccaggcgtgcggc
accggtgcctgtgcggcggctgtcgcggccatcagtcagggctggatggactcgccgttg
ctgatcgacctgcccggagggcgcctgtccatcgaatgggctgggccgggacattctgtc
atgatgaccggccctgcagtcagggtctatgaaggccaagtccgtctttga
DBGET
integrated database retrieval system