Pseudomonas sp. KUIN-1: KUIN1_02740
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Entry
KUIN1_02740 CDS
T09878
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03030
DNA replication
psku03410
Base excision repair
psku03420
Nucleotide excision repair
psku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUIN1_02740
03410 Base excision repair
KUIN1_02740
03420 Nucleotide excision repair
KUIN1_02740
03440 Homologous recombination
KUIN1_02740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psku03032
]
KUIN1_02740
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_02740
Enzymes [BR:
psku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUIN1_02740
DNA replication proteins [BR:
psku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KUIN1_02740
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KUIN1_02740
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUIN1_02740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
REF
Motif
Other DBs
NCBI-ProteinID:
BBN61084
LinkDB
All DBs
Position
complement(296534..299299)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLATSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFD
AKGGTFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL
TVEEPTAEAREAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKIKVGQHAKFAINLLANCAIDGD
QAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQLSFDQ
IALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPVLNDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF
RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccactcgtcctggtagacggttcctcctacctctaccgcgccttccac
gcactgccaccactggccacctccaaaggattgccgaccggtgccgtcaagggcgtgctc
aacatgctcaaaagcctgcggcgccagtacccggacagcccgctcgccgtggtgttcgac
gccaagggcgggacgttccgtgatgcgctgtacaacgactacaaagccaaccggccgagc
atgccggacgatctgcgcgtgcaggtcgatctgctgcatgcctgcgtcaaaggcatgggc
tacccgtttctgtgcgtcgaaggcgtcgaagccgatgacgtgatcggcacgctggcacgc
agcagcgcggcggccgatcgtccagtggtgatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacattaccctggtcaacaccatgaccggcagcgtgctggatgtggcg
ggcgtgaaagagaaattcggcgtcggtccggagcacatcatcgattacctggcgctgatg
ggcgacaaggtcgacaacattcccggcgtgcccggcgttggcgagaaaaccgcggtcggt
ctgctggttggcatcggcggtggcatcaaggagctttacgagaacctcgacaaggtcgct
tccctgccgatccgtggcgccaagaccctggccgccaaactcgaagaacatcgtgagatg
gcctttttgtcttacgaactggcgaccatcaagatcgacgtcccgctggacatcgagctg
gatcaattgcattgcggcgagcctgaccgtgacacattgatggagctgtacgccgagctg
gaattcaagagctggatcgaagacctgcaacgcgacgccaagcgcgccggccaggagctg
accgtcgaagagccgaccgccgaagccagggaagccgcctatgaagtcattcttgaacag
ggccagttcgatgcctggctgaagaagctgcaggccgcgccgctgtttgccttcgtcacc
cagagcaacggcactgatgcccagcgtgcgcaactggtcggcctgtccttcgccattcag
acccacgaagccgcttacattccgctgacccactcctacatgggcgtgccgcagcaactg
gaccgcgacacggtgctcaaggcgctcaagccgctgctggaagacccggacaaaatcaag
gtcggccagcacgccaagttcgccatcaacctgcttgccaattgcgcgatcgacggcgat
caggctcaaggcatcgacctgcagggcgtgcgcttcgacaccattctggaatcctacgta
ctggactccaccgccacccgccacgaccgcgacagcctggtggccaagtacctgacgcac
acgccgatcaatttccaggagattgccggcaaaggcgccaaacagctgagctttgaccag
attgccctggaacaggctggcaattacgccgccgaagaagcggacctgaccctgcgcctg
catgaagtcttcgacgcgcggctggccgcgattccgaccctgcagccggtattgaacgat
atcgagatgccgctggtgcctgtcctggcgcgtatcgagcgccagggcgcgctggtcgat
gccaacctgctgggcatccagagtgtcgaactgggcgacaagatgaccgcgctggagcgc
gaagccttcgccattgccggcgaagagttcaacctcggctcgcccaagcagctgggcgtg
attctctacgaaaaactcggcatgccgattctcagcaagaccgccaccggccaggcatcg
actgccgaagccgtgcttgccgaactcgcggagcaggatttcccgctgcccaaggtgctg
atgcaataccgctcgatgagcaagctcaagagcacctacaccgaccgcctgccggagcag
atcaacccgcgcaccggacgtattcacacctcctatcatcaggcggtggccgttaccggg
cgcttgtcctccagcgatccgaacctgcagaacatcccgattcgtaccgctgaagggcgg
cgcatccgtcaggcattcgtggcgccgaagggctacaagctgctggccgccgactattcg
cagatcgaactgcgcatcatggcgcatctggcccaggacgaaggcttgctgcatgcattc
cgcaatgacctggacgttcaccgcgccacggcggcggaagtcttcggcgtcgagctggaa
aacgtcaccactgacatgcgtcgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgttcggcctggccaagcagattggcgtggaccgcaagcagtcacaggcgtac
gtcgaccgctacttcgcccgctaccccggcgtgctgaactacatggaacgcacccgcgcc
caggctgccgagcaaggtttcgtcgagaccatcttcggtcgtcgcctgtacctgccggac
atcaacgccaagaaccagtccctgcgcaaaggcgcggaacgcatggcgatcaacgcgccg
atgcagggcaccgctgcggatatcatcaagaaagccatggtggcggtgaacggctggctg
gacgagtccggcctggatgcacgggtaatcctgcaggtacacgatgaactggtgcttgaa
gtgcgcgaggacctggtcgatcagatcagtgaacagatccgtccgcacatgagcggcgca
gcagaattggccgtgccgttgctggtagaagtgggggttggcaacaattgggacgaggct
cactga
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