Pseudomonas sp. KUIN-1: KUIN1_07360
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Entry
KUIN1_07360 CDS
T09878
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUIN1_07360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psku02022
]
KUIN1_07360
02035 Bacterial motility proteins [BR:
psku02035
]
KUIN1_07360
Two-component system [BR:
psku02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KUIN1_07360
Bacterial motility proteins [BR:
psku02035
]
Pilus system
Twitching motility proteins
KUIN1_07360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
HTH_30
HTH_50
AAA_5
Pre_tape_measure
AAA_22
AAA_19
HTH_23
CATRA-C
AAA
Motif
Other DBs
NCBI-ProteinID:
BBN61546
LinkDB
All DBs
Position
complement(833466..834803)
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AA seq
445 aa
AA seq
DB search
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHDWLAREPFDMCLTDMRLPD
GNGLELVQHIQHGYPHVPVAMITAHGNLDTAIHALKAGAFDFVTKPVDLGRLRELVNSAL
SLPGAQPTRSIDNRLLGDSLAMRTLRSQIGKLARSQAPIYISGESGSGKELVARLIHEQG
PRIDKPFIPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHTGTLFLDEVADLP
LAMQVKLLRAIQEKSIRSVGGQQEQIVDVRILCATHKNLNAEVAAGRFRQDLYYRLNVIE
VRVPSLRERREDIDQLAASVLKRLAGNGAQPVARLNAQALETLKSYRFPGNVRELENMLE
RAYTLCENDEIHASDLRLTESASPQENDGPSLADIDNLEDYLESVERQLILQALEETRWN
RTAAAERLSLSFRSLRYRLKKLGLD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacggcaaaaaatcctgatagtcgatgatgagccggatattcgcgaactcctg
gagatcacgctgggacgcatgaaactcgacacccgtagtgcgcgtaacgttgccgaagcc
cacgactggctggcccgcgaaccgttcgacatgtgcctgaccgacatgcgtctgccggac
ggcaatggccttgagctggtgcaacacatacagcacggctacccccacgtgccggtggcg
atgatcactgcccacggcaacctggacaccgcgatccacgcgctgaaggccggagctttc
gactttgtgaccaagccggtcgacctgggcaggttgcgcgagctggtcaatagcgcgctg
agcctgcccggcgcgcaacccacgcgcagcatcgacaaccgcctgctgggcgactcgctg
gcaatgcgtaccttgcgcagtcagatcggcaagctggcccgcagccaggcgccgatctac
atcagcggtgagtcgggcagcggcaaggagcttgtagcgaggctgatccacgagcagggt
ccgcgcatcgacaaacctttcataccggtgaactgcggcgccattccttccgaactcatg
gaaagcgaattcttcggtcatcgcaaaggcagctttagcggtgcccacgaagacaagcct
ggtctgtttcaggcggcgcacaccgggacgctgtttctcgatgaagtcgcagacctgccg
ctggccatgcaggtcaaactgctgcgcgccattcaggaaaaatccatccgcagcgtcggc
ggccagcaagagcagatcgtcgacgtgcgcattctgtgcgccacccacaagaacctgaat
gcagaggtcgcggccggtcggttccgtcaggatctgtattaccgattgaacgtgatcgaa
gtgcgcgtgccctcgttgcgcgagcggcgtgaggatatcgaccaactggcagccagcgtg
ctcaagcgccttgccgggaacggcgcacagcccgtcgcgcgcctgaacgcgcaggcgctg
gaaacgctgaagagctaccgcttccccggtaacgtgcgcgaactggaaaacatgctggag
cgcgcttacacgctgtgcgagaacgacgaaatccacgccagcgacctgcgcctgacagag
tctgccagccctcaggagaacgacggcccgagcctggccgatatcgacaaccttgaagac
tacctggaaagcgtcgaacgccagctcattctgcaggcgctggaagaaacccgctggaac
cgcaccgctgcagcagaaagactcagtttgtcgttcaggtcactgcgctatcgcctgaag
aagctgggcctggattga
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