Pseudomonas sp. KUIN-1: KUIN1_11280
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Entry
KUIN1_11280 CDS
T09878
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psku03009
]
KUIN1_11280 (rlmF)
Enzymes [BR:
psku01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
KUIN1_11280 (rlmF)
Ribosome biogenesis [BR:
psku03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KUIN1_11280 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
UPF0020
Methyltransf_12
PrmA
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
BBN61938
LinkDB
All DBs
Position
complement(1246274..1247260)
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AA seq
328 aa
AA seq
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MTDTRKPPRKKPQRPAKPAAPREKATLHPRNRHQGQYDFAKLIKSSPELAAFVILNPYGK
ESIDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGV
IPRGASIKALDIGTGANCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKANGLSKAISV
RQQANRKQILLGLLDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLN
FGGQSQELWCDGGEIGFITQLIQESALLPSQVAWFSTLVSKASNLPPIHSALKKAGALEV
KVVEMGQGQKQSRFVAWTFLDKAQRAPG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacccgcaaaccaccgcgcaagaagcctcagcggccagccaaacctgctgcg
ccgcgtgaaaaggccaccttgcacccgcgcaatcggcatcagggccagtacgactttgcg
aagctgatcaaatccagccccgagctggcagccttcgtgatcctcaatccttacggcaag
gaaagcatcgacttcgccaatccgcaggcggtacgggtgttcaaccgcgcgctgctcaaa
gcgttctatggcatcgcccattgggacattccggccgattacctgtgcccgccgattccg
gggcgtgcggactatctgcacttccttgccgacctgctggccgaagataacgaaggcgtg
ataccacgcggcgcctccatcaaggcgctggacatcggcactggcgccaattgcatctac
ccgttgctggggcatagcgactatggctggcagttcgtgggttcggacatcgacagcacc
gccatcgccgcagccaccacgattgtgaaggccaacggcctcagcaaggccatcagcgtg
cgccagcaggccaatcgcaagcagatcctgctcgggctgctcgacagcagcgaacgcttc
cacgtcagcctctgcaacccgcccttccatgcctcgctggaagaagcgcagcgtggcagc
cagcgcaagtggcgggcgctgggcaaggctgatcccaagcgcaagctgccggtgctcaat
ttcggtggacagtcgcaggagttgtggtgcgacggcggcgagatcggcttcataacgcag
ttgatccaggaaagcgccttgctgccgagccaggtggcgtggttcagcacactggtgtcc
aaggcctccaacctgccgccgatccacagcgccctgaaaaaagccggcgcgctggaagtg
aaggtagtggaaatgggccagggccagaagcaaagccgttttgtggcctggaccttcctc
gacaaggcacagcgcgcaccaggctga
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