Pseudomonas sp. KUIN-1: KUIN1_14410
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Entry
KUIN1_14410 CDS
T09878
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03030
DNA replication
psku03430
Mismatch repair
psku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUIN1_14410
03430 Mismatch repair
KUIN1_14410
03440 Homologous recombination
KUIN1_14410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psku03032
]
KUIN1_14410
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_14410
Enzymes [BR:
psku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUIN1_14410
DNA replication proteins [BR:
psku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUIN1_14410
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUIN1_14410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBN62251
LinkDB
All DBs
Position
1587660..1591181
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGSG
IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV
AQASEGVIALSAAKEGEIGMALLGGNPGEADELLREWLEVFPDRFYIEVQRTNRANDEEH
LHAAVALAERHGAPLVATNDVRFIKQADFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIDGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITDARQNGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFELEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSRDSGHSDLFGGLFVEADADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRVTVRAEALKGDRLRWLGDLCKRHRGACPITVDYTGQDARAL
LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatattcgctggttgacggtctg
gttcgggtcaaaccgttgatcaaggcgctgaccggcatgaacatgcccgccgtggcggtg
accgaccagaacaacatgtgctcgctggtcaagttctacaaggccgcccagggctccggc
atcaagccgatctgcggtgtcgacctgtggctggcgggcagggacgaagatgccgcgctc
agccgcatcagcctgctggcgatgaatgcccagggctaccgcaacctgaccgagctgatt
tcccgaggctttatcgaaggccagcgcaacggtcagatcgtcattcagcgccagtgggtc
gcgcaggccagtgaaggtgtgattgcgctttctgcggccaaggaaggcgagatcggcatg
gccttgctcggcggcaatccgggggaggccgacgaactgctgcgcgagtggctggaagtc
tttcctgaccgcttctatatcgaagtgcagcgcaccaaccgcgccaatgacgaagaacat
ctgcacgctgcggtggccctggccgagcgtcacggtgcaccgctggtggcgaccaacgat
gtgcgcttcatcaaacaggccgatttcgaagctcacgaaacccgtgtgtgcatcggtgaa
gggcgtgcgctggacgacccgcgtcgctcgcacaactacagcgatcagcaatacctgaaa
agtccggaagaaatggccgaactgttcagcgatctgccggaggcgctggaaaacaccgtc
gagattgccaagcgctgcaacatcgacgtcaagctgggcacgcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtctccttcgacggcctc
gaagagcgtcttgcagtcctgttgcccaaggacacgaccgaagattacgaagccaagcgt
caggtgtatgtcgaccggctgaatttcgagctggatatcattatccagatgggcttcccc
ggttacttcctgatcgtgatggacttcatccagtgggccaagagcaacggcgtgccggtg
gggccgggccgtggttcgggtgccgggtcgctggtcgcctatgtgcagaagatcaccgac
ctcgacccgctggaatacgacctgctgttcgaacgcttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggatggtcgtgaccgggtgatcgaatatgtg
gccgagaagtacggtcgcaacgcggtcagccagatcatcaccttcggttccatggctgcc
aaggcggtggtgcgtgacgtggcgcgggtgcagggcaagtcttacgggctggctgatcgt
ctgtcgaagatgatcccgttcgaagtcggcatgaccctcgaaaaagcctacgagcaggaa
gagattcttcgcgatttcctcaaggtcgatgaggaagctgcggaaatctgggagatggcg
ctcaagctcgaaggcatcgtgcgtaacgtcggcaagcacgccggcggtgtggttattgcc
ccgaccaagctgaccgacttctcgccgatttattgcgacgaggccggtgacggtctggtg
acccagttcgacaaggacgatgtcgaggctgcggggctggtgaagttcgacttcctcggt
ctgcgtaccctgaccatcatcgactgggcactcaagaccatcaaccgcgaccgcgccaag
gtcaacgaagaaccgctggacatcgcgttcattccgctcgatgacatgccgacctatcag
ttgctgcagcgcgccgagaccacggcagtgttccagctcgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgtctggaagacctgatcgcactggtggcactgttc
cgtcccggcccgttgcaatcgggcatggtcgacgacttcatcaaccgtaaacacggtcgc
gccgagctgtcctatccgcacgtcgattaccagtacgaaggcctcaagccggtactggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtcatggcc
ggttacacccttggcggtgcggacatgctgcgtcgtgccatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggtggtttcatcgatggctgcaagaccaataacatcgacccg
gacctggccggtaacatcttcgacctggtggaaaagttcgccggttacggtttcaacaag
tcccactccgcggcctacgggctggtgtcgtaccagactgcctggctgaagactcactac
ccggcgccgttcatggcggcggtattgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgcctcgatgcgccggacgtgaacacc
tcggagttcaagttcacggtaagcgacgatggccgcattctttatggcctcggtgcgatc
aagggggtaggcgaggggccggtcgaggcgattaccgacgcgcgccagaacgggccgttc
aaggacctgttcgacttctgcgcccgcgtcgacctcaagcgggtcaacaagcgaaccctg
gatgggctgattcgcagcggtgcgctggatcgcctcgggccgtacttcgaactggagccc
aaggcctatcaggccaatatcgaccgtaaccgttcggtgctgcttgccgcactggaagaa
gccattcaggcagcagagcagacggcgcgcagtcgcgacagtggtcactcggacctgttc
ggcggcctgttcgtcgaagcggatgccgatgtctacgccaaccatcgcaagacccgcgag
ctgagcctcaaggatcgtctgcgtggcgagaaggaaaccctggggctgtacctgaccggg
catccgatcgatgaatatgaaggcgagatccgccggttcgcccggcaacggatcatcgat
ctcaagccggcaagagacactcagacggtggcaggtctgatcattgccctgcgcgtcatg
aagaacaagaagggcgacaagatggggttcattaccctggacgatcgctcggcgcgcatc
gaggcgtcgctgtttgccgaagcgttccattcggctcagtcactgttgcagaccgatgct
atggtggtggtcgagggcgaagtcagtaatgatgacttctccggcgggctgcgcctgcgg
gccaagcgtgtcatgagtatcgaggatgcccgcaccaatctggccgagagcctgcgtgtg
acggtgcgtgccgaagcgctcaagggcgaccggctgcgctggctgggcgatctgtgcaag
cgccatcgcggtgcctgtccgatcacggtggactacacggggcaggacgcccgtgcattg
ctgcaattgggagaagcatggcggattgatcctgcggacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgttga
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