Pseudomonas sp. KUIN-1: KUIN1_16220
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Entry
KUIN1_16220 CDS
T09878
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psku03009
]
KUIN1_16220
Enzymes [BR:
psku01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
KUIN1_16220
Ribosome biogenesis [BR:
psku03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KUIN1_16220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
BBN62432
LinkDB
All DBs
Position
1775630..1776586
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AA seq
318 aa
AA seq
DB search
MTNIAPPTPGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRIPPVRVPERDEPVPVAQALLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMA
LVRGNWATALKQVRAPLMKSNLRSGERMVEVNEEGKEALTIFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHAIAGDTKYGDENFSREIRDLGGKRLFLHAYMLTVPMPDGSKLNV
QAPVDDMWAKTVERLSAP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatattgcccctccaacccccggcgtccagctggttgaggttgccccggaactt
gccggtcaacgcatcgataactttctgatcacttatctcaagggtgtgcccaaaaccttg
atttaccgcattttgcgcaaaggcgaagtgcgtgtgaacaaggggcggatcaagccggag
tacaagttgcaggcaggcgatatcgtgcgcattcctcctgtgcgcgtgcctgagcgcgac
gagcccgtgccggttgcgcaggcgctgctgcagcgtctcgaagcggcgattgtctatgaa
gacaaggcgcttatcgtgctcaacaagcctgcaggtattgccgtgcatggcggcagcggc
ctgagctttggcgtgatcgaagcgttccgccagttgcgcccggatgccaaggagctcgag
ctggtgcaccgccttgatcgcgatacatccggtctgctgatgatcgccaagaaacgcagc
atgctgcggcatctgcacgaagccctgcgcggcgacggcgtcgacaagcgctacatggcg
ctggtccgcggtaactgggcaacggcgctgaagcaggtgcgtgcgccattgatgaaaagc
aacctgcgctccggcgagcgcatggtcgaagtgaatgaagagggcaaggaagccctgacg
attttcaaggtgctgcgtcgtttcggtgacttcgccaccatggtcgaagccaagccggtc
accgggcggactcaccagatccgtgtgcacaccttgcatgcggggcatgccatagcaggt
gacaccaagtacggtgacgagaatttcagtcgcgaaattcgcgatctgggcggcaagcgt
ctgtttctgcatgcctacatgctgacggtgccgatgcccgatggcagcaaacttaatgtg
caggcgcctgtcgatgacatgtgggccaaaacagtggagcgtctgagtgcgccgtga
DBGET
integrated database retrieval system
