Pseudomonas sp. KUIN-1: KUIN1_16970
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Entry
KUIN1_16970 CDS
T09878
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_16970 (sbcD)
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KUIN1_16970 (sbcD)
Archaeal homologous recombinant proteins
KUIN1_16970 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BBN62507
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All DBs
Position
complement(1871713..1872957)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLADRKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLDDGVLDA
ERLLLPLPDANGDIKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIAAADLKRQPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEER
IRYSGSPIPLSFSEISYQHQILEINCDGETLTSVEPLLIPRAVNLQRLGPAPLADLLVQL
KALPDIDLLADPDRQPWLEVRVRLDEPQPDLRNQIENALQGKAVRLVRIGAEYAGKGSAD
GSEGDATLIELDQLTPQELFSRAWQDNFGSEVDEQTLTDFATLLREVQQESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctctgactggcacctgggtcagaacctgcacggccaggagcgg
gatttcgaacacgcctgcttcctgacctggctgctggcccgtctggccgaccgtaaaccg
gatgtactgttgatcgcgggcgacatcttcgacaccgtcaacccgccggtcaaagcgcag
gagcgcctgtacgacttcatcgtcaacgcccacgaacagcagccattgctgaccatcgtg
atgatcgccggcaaccatgactccggctcgcgtatcgaacttcccgccccgctgatgcgc
cgcttgcgcactcacgcgctgggccgggtgatgtggctggacgacggcgtgctggatgcc
gaacgcctgctgttgccattgccagacgccaatggcgacatcaaggcctggtgcctggcg
ctgcccttcctgcgtcccgccgaagtcaccggcccgaccctgggcgatgactacctgcgt
ggcatcggccgggtgcatgagctgctgatcgcggcggctgacctcaagcgccagcccggt
caggcattgatagccatcagccacgcccacatggcaggcggctcggtctcggaagactcc
gagcgcagcctgatcatcggcaacgccgaagccctgccggccagcctgttcgggccgagc
atcacctatgttgcgctgggccacctgcacaaaccgcagcgggtcaacggcgaagagcgc
attcgctacagcggctcgccgatcccgctgtccttttcggaaatcagctaccagcaccag
attctggagatcaattgcgacggcgagacgctgaccagcgtcgagccgttgctgatccct
cgcgccgtcaacctgcaacgcctcgggcctgcaccattggccgacctgctggtgcagctc
aaagcattgcccgacatcgacctgcttgccgacccggaccgccagccgtggctggaagtg
cgcgtgcgtctggatgaaccccagccggacctgcgcaaccagatcgaaaacgccctacag
ggcaaggccgtgcggctggtgcgcatcggtgccgaatacgccggtaaaggcagcgcggac
ggcagcgagggtgacgccacgctgatcgaactggaccagctcacgcctcaggaactgttc
agccgtgcctggcaggacaacttcggcagcgaggtcgacgaacagacgctgaccgatttc
gccacgctgctgcgtgaagtccagcaggagagcgagcagccatga
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