Pseudomonas sp. KUIN-1: KUIN1_17700
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Entry
KUIN1_17700 CDS
T09878
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_17700
Enzymes [BR:
psku01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
KUIN1_17700
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
KUIN1_17700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BBN62580
LinkDB
All DBs
Position
1967238..1968797
Genome browser
AA seq
519 aa
AA seq
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MAAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVL
IFSAMRHFAEALRERGVRVQYVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLE
QSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFFYREMRRKSRLLLNGDGTPVG
GAWNFDAENRKALPKGVAAPYPMRFSPDAITRQVLKLVGERFASHYGSLDNFDYPVTHAD
AQALWECFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWSG
RVGLNAAEGFIRQLIGWREYVRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQ
AVGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAIYMDAFDWVELPNTLGMVMH
ADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRR
NQRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagcctcttccattgacccaagcccctcgtctccacctgatcctcggcgat
cagctttccttcgatctcgcatccttggcgggtctgatccccgagcgcgacacggtcctg
atggtcgaggtcatggaagaggcgagtcatgtgccgcatcatccgcagaagatcgtgctg
atcttcagtgccatgcgtcattttgccgaggcgctgcgtgagcgtggtgttcgggtgcag
tacgtcatgctcgatgatccgcagaacaccgggtcggtgccgggtgagttacagcgctgg
caggctctgttgcgagcagaagagctgcacatcaccgagtgcggcgactggcgtctggaa
cagtcgatcaaggactgcgggttgcccatccagtggcacgccgatacgcgctttctttgt
tcccgcgacgagttctcgtcgtgggcgcacggcaagaagcagttgcgcatggagttcttc
tatagggagatgcgccgcaaaagcaggctgctgttgaacggcgacggtacgccggtcggt
ggtgcctggaactttgatgccgagaaccgcaaggcactgcccaagggcgtggcagcgcct
tacccaatgcgcttttccccggacgctatcacccgccaggtactaaagctggtgggtgag
cgctttgccagccattacggctcgctggataatttcgactatccggttacgcatgccgat
gcccaggcgctgtgggagtgctttctggattacggcctggccggtttcggcgattatcag
gacgccatggctactgacgagccgtttctgtttcatgcgcgcatcagtgcggcgttgaac
atcggcctgctggatttacgccaggtgtgcagtgacgttgaatccgcgtactggtcgggc
agggtggggctgaatgccgccgaaggtttcattcgccaactgatcggctggcgggagtat
gtgcgtggcgtctattggctgaaaatgcccgattacgcgagcggcaatctgttcggtaac
agccggccgctgcccgagttttactggaccggcgaaacgcagatgaactgcatgagtcag
gccgtcggccagagcctgaagcatgcctacgcccaccacattcagcgcctgatggtgacc
ggcaactttgccctgcttgccgggatagtgccggagcagatctgcgagtggtacctggcg
atctacatggatgccttcgactgggtcgagctgcccaatacgctgggcatggtcatgcat
gccgatggcggctatctgggctccaaaccctattgcgccagcggccagtacatcaagcgc
atgtctgactattgccgcggctgtgcgtacaaggtcactgaaagcaccactgaggatgcc
tgtccgttcaatgcgctgtactggcatttcctgatgcgccatggcgacctgttgcgtcgc
aatcagcgcatggcgattatctataaaaaccttgatcgcatggctgagcccaaacagcag
gcgctgtgggcgcgtggcgagcatctgttggccaggctcgatgccggagaggcgctttga
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