Pseudomonas sp. KUIN-1: KUIN1_23980
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Entry
KUIN1_23980 CDS
T09878
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psku03000
]
KUIN1_23980
Transcription factors [BR:
psku03000
]
Prokaryotic type
Helix-turn-helix
GntR family
KUIN1_23980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
TrmB
HTH_Crp_2
Fe_dep_repress
HTH_CodY
HTH_27
GMT-wHTH
DUF6880
HTH_11
HTH_5
HTH_36
Ribosomal_S25
HTH_41
MarR
HTH_29
HTH_23
HTH_28
HTH_20
EAD11
TFIIE_alpha
BLACT_WH
Motif
Other DBs
NCBI-ProteinID:
BBN63208
LinkDB
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Position
complement(2710279..2711031)
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AA seq
250 aa
AA seq
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MKRLPLDDTFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLADACDIYELRCVLEGLIVQLFTLRAKPKDIRALE
KALEENRQALKEGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNKEMELMVEAIKSGDPLAAHQASVDHVRNAARVALEYLKSKQDEVSKVRDIVAP
VALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgcctctcgacgacaccttcaaggtcaaccgcaaccccgtcacgctgcgc
gagatcgtgctggacaagctgcgcagcgcaatcatgaactttcagctgctgccgggtgac
cgtctggtcgagcgtgatctgtgtgaccgcctcggtgtgagccgcacctcggtacgcgag
gcactgcgccacctggaatccgaaggtctggtcgagttcgccgatgccaagggcccgcgt
gttgccatcatcacgctggctgacgcgtgcgatatctacgagctgcgctgcgtgctcgaa
ggcctgatcgttcagctgtttaccctgcgggccaaacccaaggacattcgcgcactggaa
aaagccctggaggaaaatcgtcaggcgctcaaggaaggcgaactgcagcaggtgatcgac
tcggtccagggtttctacgatgtactgctggaaggctcgggcaaccatgtggccgcgacc
cagttacgccagttgcaggcgcgcatcagctacctgcgcgccacctcggtatcccaggaa
aaccgccgcggtgccagcaacaaggaaatggagctcatggtcgaagcgatcaagagcggc
gacccgctggccgcgcatcaggcgtcggtcgatcacgtacgcaacgccgcacgcgtggcg
ctggaatacctcaaatccaagcaggacgaagtcagcaaagtccgtgacatcgtcgccccc
gtcgcgctgaaagaacctcgcataggtcgctga
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