Pseudomonas sp. KUIN-1: KUIN1_32500
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Entry
KUIN1_32500 CDS
T09878
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku00071
Fatty acid degradation
psku00280
Valine, leucine and isoleucine degradation
psku00310
Lysine degradation
psku00362
Benzoate degradation
psku00380
Tryptophan metabolism
psku00410
beta-Alanine metabolism
psku00640
Propanoate metabolism
psku00650
Butanoate metabolism
psku00907
Pinene, camphor and geraniol degradation
psku00930
Caprolactam degradation
psku01100
Metabolic pathways
psku01110
Biosynthesis of secondary metabolites
psku01120
Microbial metabolism in diverse environments
psku01200
Carbon metabolism
psku01212
Fatty acid metabolism
Module
psku_M00087
beta-Oxidation
psku_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KUIN1_32500 (fadB)
00650 Butanoate metabolism
KUIN1_32500 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KUIN1_32500 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KUIN1_32500 (fadB)
00310 Lysine degradation
KUIN1_32500 (fadB)
00380 Tryptophan metabolism
KUIN1_32500 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KUIN1_32500 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KUIN1_32500 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KUIN1_32500 (fadB)
00930 Caprolactam degradation
KUIN1_32500 (fadB)
Enzymes [BR:
psku01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KUIN1_32500 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KUIN1_32500 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KUIN1_32500 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KUIN1_32500 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBN64060
LinkDB
All DBs
Position
complement(3810727..3812892)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNEFRQAVDAVKADASVKGVIVTS
GKDSFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMASSARVGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGAVDAVVAPEKLQAAALDLIQRAISGEFDYTAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAAQSLIGLFLNDQEL
KKKARGYDKIAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGALYQPTAKLREMAANGQSFFGQASSE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaatgagttc
cgccaggcagtcgatgcggtcaaggccgacgcatcggtcaagggcgtgattgtcaccagt
ggcaaagattcattcattgtcggcgccgatatcaccgaattcgtcgacaacttcaagttg
ccggaagctgagctggtcgccggcaatctggaagcgaacaggattttcagtgatttcgaa
gacctgaacgtgccgactgtcgtggcaatcaacggtatcgcgctgggcggcggtctggaa
atgtgcctggccgcagactatcgagtcatggccagcagcgctcgtgtcggtctgcccgag
gtcaagcttggcctgtacccgggtttcggcggcacagtccgtctgccacgcattatcggt
gccgacaacgcgatcgagtggattgcctcgggcaaggaaaacgccgcggaagacgctttg
aaggtcggtgccgtcgatgccgtggtagcgcctgaaaaattgcaggccgccgcccttgat
ctgatccagcgcgccatttccggcgagttcgattacacggccaagcgtcagccgaagctg
gacaagctcaagctcaatgccatcgaacagatgatggcattcgaaaccgccaagggcttc
gttgcaggtcaggccggcccgaactatccggccccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggagatcgaagccgccggtttcgtgaaa
atggccaagacccctgctgcgcagagtctgatcggcctgttcctgaacgatcaggagctg
aaaaagaaagccaggggctacgacaagattgccaaggacgtgaagcaggcggccgtactg
ggcgccgggatcatgggcggcggcattgcctatcagtcggcagtcaaaggtacgccgatc
ctgatgaaggatattcgcgaagaagccattcaactgggtctgaacgaagcgtccaaactg
ctgggtggtcgcctggagaaaggtcgtctgaccgcggcgaagatggccgaagcgcttaac
gccattcgtcctacgctgtcctacggcgatttcggcaacgtcgatctggtcgtcgaagct
gtcgtcgagaaccccaaggtcaagcaggcggtactggccgaagtcgaagccaacgtgggt
gaaaacaccattctggcgtccaacacctcgaccatctcgatcagcctgctggcccaggcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaaatccagtgaagaagcggtcgcgacgaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttctggtc
aaccgtgtgctgttcccgtatttcggtggtttcgccagactggtcagtgcgggcgtggat
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggccctgcctacctg
atggacgtggtcggtatcgacaccggccaccatggtcgtgatgtcatggccgaaggtttc
cctgatcgcatgaaagatgatcgccgctctgcgatcgatgccctgtacgacgccaagcgc
ctcgggcagaagaacggcaagggtttctacgcctacgaaacggacaagaagggcaagccc
aaaaaggtcaatgacccggcggtgctggacgtgctcaagccgattgtctacgagcagcgc
gaagtcagcgatgaagacatcgtcaactggatgatgatcccgctgtgtctggaaacggtc
cgctgcctggaagacggcattgtcgaaaccgctgccgaggctgacatgggcctgatctac
ggtatcggtttccctccgtttcgtggcggcgcgctgcgctacatcgattccatcggtgtt
gccgaattcgttgccctggctgaccaatacgccgaactgggtgccctgtatcaaccgact
gcgaagctgcgtgagatggccgccaacggccagagcttcttcggtcaagcgtcttccgag
gaatga
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