Pseudomonas sp. KUIN-1: KUIN1_32830
Help
Entry
KUIN1_32830 CDS
T09878
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psku03000
]
KUIN1_32830
Transcription factors [BR:
psku03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
KUIN1_32830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_6
TetR_C_24
HTH_22
TetR_C_41
Nmad5
HTH_36
Motif
Other DBs
NCBI-ProteinID:
BBN64093
LinkDB
All DBs
Position
3848402..3849004
Genome browser
AA seq
200 aa
AA seq
DB search
MRLTDQKRESIVQAAIAEFGDRGFEITSMDRIAARAKVSKRTVYNHFPSKEELFAEMLQR
LWSCAPPQAEVVFRPQIGLREQLRELLWGKMRNLTNSHFIDLARVVVGATIHSPERAQVW
MARINEREETFSAWIRAAQKDGRLKPVDPAFAATQMHALLKSFAFWPQVTFSAALLTPEE
QHTVVESTLDMFLGWYEITR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttaccgatcagaaacgcgaatccatcgtccaggcggctattgccgaattcggc
gatcgtggcttcgagatcaccagcatggaccggatcgccgcgcgggccaaggtttccaag
cgtacggtctataaccatttccccagcaaggaagaactgttcgccgagatgctgcagcgc
ctctggagctgcgccccgccgcaggctgaggtggtttttcgcccgcaaatcgggctgcgc
gagcagttgcgggaattgctgtggggcaagatgcgcaatctgaccaacagccactttatc
gacctggcccgcgtggtggtcggcgccaccattcactcacccgaacgggctcaggtgtgg
atggcgcgtatcaatgaacgagaagaaaccttcagtgcctggattcgcgccgcgcagaag
gacggccgcctgaagccggttgacccggcctttgccgcgacgcaaatgcatgcattgctc
aagtcgttcgcgttctggccgcaggtgacgttcagtgctgcattgcttacccccgaggag
cagcacacggtggtcgagtcgacgctggacatgtttctcggctggtacgaaataacccgc
tga
DBGET
integrated database retrieval system
