Pseudomonas sp. KUIN-1: KUIN1_39470
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Entry
KUIN1_39470 CDS
T09878
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KUIN1_39470 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_39470 (ung)
Enzymes [BR:
psku01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KUIN1_39470 (ung)
DNA repair and recombination proteins [BR:
psku03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KUIN1_39470 (ung)
Prokaryotic type
KUIN1_39470 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBN64757
LinkDB
All DBs
Position
complement(4598477..4599169)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKNALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIAPIDWRLPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagcccagctggaaaaacgccctgcgtgacgaa
ttcgaacaaccctacatggctcaattgcgcgagtttctgcgtcaggagcacgcggcgggc
aaggaaatctatccgcccggtccgctgattttcaatgcgttgaactccacgccgctggat
aacgtgaaagtggtcattcttggccaggatccgtatcacggcccgaatcaggcgcatggt
ctgtgcttctcggtgcaaccgggtgtgccgacgccgccatcgctggtcaacatctacaaa
gagctgaaacgcgacctgaacatcgatattccgaaccacggttgcctgcaatcctgggct
gatcagggcgtgctgttgctgaacaccaccctgaccgtcgaacgtgccaacgcggcgtcg
catgcgggcaaaggctggcagcacttcactgaccggatcatccaagtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgcgaccaagcatctggtgctgacctctgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggcaacgggcacttcgggcgggccaacaagtaccttgagcaaaacggcatc
gcgccgattgactggcgcttgcctgcgctctga
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